Evidence map›Paper›PMID 38938443›Full record

ArticleOpen veterinary journal2024

Immunoinformatics approach for designing a multiepitope subunit vaccine against porcine epidemic diarrhea virus genotype IIA spike protein.

Ella Mae Joy S Sira, Edward C Banico, Nyzar Mabeth O Odchimar, Lauren Emily Fajardo, Ferdinand F Fremista, Hanna Angelika B Refuerzo, Ana Patrisha A Dictado, Fredmoore L Orosco

Abstract read
In one paragraph

Article in Open veterinary journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ella Mae Joy S SiraVirology and Vaccine Research and Development Program, Industrial Technology Development Institute, Department of Science and Technology, Taguig City, Philippines.
Edward C BanicoVirology and Vaccine Research and Development Program, Industrial Technology Development Institute, Department of Science and Technology, Taguig City, Philippines.
Nyzar Mabeth O OdchimarVirology and Vaccine Research and Development Program, Industrial Technology Development Institute, Department of Science and Technology, Taguig City, Philippines.
Lauren Emily FajardoVirology and Vaccine Research and Development Program, Industrial Technology Development Institute, Department of Science and Technology, Taguig City, Philippines.
Ferdinand F FremistaDepartment of Biology, College of Arts and Sciences, University of the Philippines Manila, Philippines.
Hanna Angelika B RefuerzoDepartment of Biology, College of Arts and Sciences, University of the Philippines Manila, Philippines.
Ana Patrisha A DictadoDepartment of Biology, College of Arts and Sciences, University of the Philippines Manila, Philippines.
Fredmoore L OroscoVirology and Vaccine Research and Development Program, Industrial Technology Development Institute, Department of Science and Technology, Taguig City, Philippines.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Porcine epidemic diarrhea (PED), caused by the porcine epidemic diarrhea virus (PEDV), is associated with high mortality and morbidity rates, especially in neonatal pigs. This has resulted in significant economic losses for the pig industry. PEDV genotype II-based vaccines were found to confer better immunity against both heterologous and homologous challenges; specifically, spike (S) proteins, which are known to play a significant role during infection, are ideal for vaccine development. Aim: This study aims to design a multi-epitope subunit vaccine targeting the S protein of the PEDV GIIa strain using an immunoinformatics approach. Methods: Various bioinformatics tools were used to predict HTL, CTL, and B-cell epitopes. The epitopes were connected using appropriate linkers and conjugated with the CTB adjuvant and M-ligand. The final multiepitope vaccine construct ( Results: Six epitopes were predicted to induce antibody production, ten epitopes were predicted to induce CTL responses, and four epitopes were predicted to induce HTL responses. The assembled epitopes conjugated with the CTB adjuvant and M-ligand, Conclusion: In conclusion, the multi-epitope subunit vaccine construct for PEDV designed in this study exhibits promising antigenicity, stability, and immunogenicity, eliciting robust immune responses and suggesting its potential as a candidate for further vaccine development.

Indexed as

Computational BiologyCoronavirus InfectionsPorcine epidemic diarrhea virusSpike Glycoprotein, CoronavirusSwine DiseasesVaccines, SubunitViral VaccinesAnimalsEpitopesEpitopes, B-LymphocyteEpitopes, T-LymphocyteGenotypeImmunoinformaticsMolecular Docking SimulationSwineEpitopesEpitopes, B-LymphocyteEpitopes, T-LymphocyteSpike Glycoprotein, CoronavirusVaccines, SubunitViral VaccinesImmunoinformaticsMultiepitope subunit vaccinePEDVReverse vaccinology

Identifiers

PMID38938443
PMCPMC11199741

What Socratic holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.