Evidence map›Paper›PMID 38942903›Full record

ArticleScientific reports2024

Cytosolic N-terminal formyl-methionine deformylation derives cancer stem cell features and tumor progression.

Dasom Kim, Jongeun Lee, Ok-Hee Seok, Yoontae Lee, Cheol-Sang Hwang

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dasom Kim *Department of Life Sciences, Pohang University of Science and Technology, Pohang, Gyeongbuk, 37673, Republic of Korea.
Jongeun Lee *Department of Life Sciences, Pohang University of Science and Technology, Pohang, Gyeongbuk, 37673, Republic of Korea.
Ok-Hee SeokDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Gyeongbuk, 37673, Republic of Korea.
Yoontae LeeDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Gyeongbuk, 37673, Republic of Korea. yoontael@postech.ac.kr.
Cheol-Sang HwangDepartment of Life Sciences, Korea University, Seoul, 02841, Republic of Korea. hwangcs@korea.ac.kr.

Funding

Korean government (MSIP) grants 2021R1A6C101A390Korean government (MSIP) grants NRF-2020R1A3B2078127Korean government (MSIP) grants NRF-2021R1A2C3004006Korean government (MSIP) grants NRF-2022M3E5F2018020Korean government (MSIP) grants RS-2023-00260454Korea University grants K2306251Korea University grants K2309781Korea University grants K2310011Korea University grants K2311611
6 · The paper itself

Abstract

Eukaryotic cells can synthesize formyl-methionine (fMet)-containing proteins not only in mitochondria but also in the cytosol to some extent. Our previous study revealed substantial upregulation of N-terminal (Nt)-fMet-containing proteins in the cytosol of SW480 colorectal cancer cells. However, the functional and pathophysiological implications remain unclear. Here, we demonstrated that removal of the Nt-formyl moiety of Nt-fMet-containing proteins (via expressing Escherichia coli PDF peptide deformylase) resulted in a dramatic increase in the proliferation of SW480 colorectal cancer cells. This proliferation coincided with the acquisition of cancer stem cell features, including reduced cell size, enhanced self-renewal capacity, and elevated levels of the cancer stem cell surface marker CD24 and pluripotent transcription factor SOX2. Furthermore, deformylation of Nt-fMet-containing proteins promoted the tumorigenicity of SW480 colorectal cancer cells in an in vivo xenograft mouse model. Taken together, these findings suggest that cytosolic deformylation has a tumor-enhancing effect, highlighting its therapeutic potential for cancer treatment.

Indexed as

AmidohydrolasesCell ProliferationCytosolNeoplastic Stem CellsAnimalsCD24 AntigenCell Line, TumorColorectal NeoplasmsDisease ProgressionHumansMethionineMiceSOXB1 Transcription FactorsAmidohydrolasesCD24 AntigenMethioninepeptide deformylaseSOX2 protein, humanSOXB1 Transcription Factors

Identifiers

PMID38942903
PMCPMC11213908

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.