Evidence map›Paper›PMID 38949658›Full record

ArticleThe Journal of cell biology2024

A fluorogenic complementation tool kit for interrogating lipid droplet-organelle interaction.

Xiao Li, Rico Gamuyao, Ming-Lun Wu, Woo Jung Cho, Sharon V King, R A Petersen, Daniel R Stabley, Caleb Lindow, Leslie K Climer, Abbas Shirinifard and 7 more

Abstract read
In one paragraph

Article in The Journal of cell biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Heterogeneity, dynamics and organelle interactions of lipid droplets.Nature reviews. Molecular cell biology · 2026
    Review
  6. Article
  7. Article
  8. Unmasking the FACES of membrane bilayers.Nature chemical biology · 2026
    Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Imaging interorganelle contacts at a glance.Journal of cell science · 2024
    Review
  18. Imaging and proteomics toolkits for studying organelle contact sites.Frontiers in cell and developmental biology · 2024
    Review
  19. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Xiao Li *Department of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0002-4187-1430
Rico Gamuyao *Department of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0002-0112-6428
Ming-Lun WuDepartment of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0009-0007-1836-272X
Woo Jung ChoCell and Tissue Imaging Center, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0001-9837-0840
Sharon V KingDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0009-0006-7695-1162
R A PetersenDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0001-6960-2948
Daniel R StableyDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0001-9187-6099
Caleb LindowDepartment of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0009-0001-9649-5671
Leslie K ClimerDepartment of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0003-0236-1822
Abbas ShirinifardDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0002-4517-6080
Francesca FerraraVector Production and Development Laboratory, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0002-4973-1520
Robert E ThromVector Production and Development Laboratory, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0002-9191-4742
Camenzind G RobinsonCell and Tissue Imaging Center, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0002-7277-692X
Yiwang ZhouDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0002-8023-205X
Alexandre F CariseyDepartment of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0003-1326-2205
Alison G TeboJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID 0000-0003-0788-5617
Chi-Lun ChangDepartment of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0003-0017-2243

Funding

Understanding Metabolism in Space and Time – Mechanistic Analysis of the Dynamic Spatial Organization of MetabolismDP2GM150192 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHANG, CHI-LUN · 2022 to 2025
$2.7M
American Lebanese Syrian Associated CharitiesNIGMS NIH HHS DP2 GM150192NIH HHS 1DP2GM150192
6 · The paper itself

Abstract

Contact sites between lipid droplets and other organelles are essential for cellular lipid and energy homeostasis upon metabolic demands. Detection of these contact sites at the nanometer scale over time in living cells is challenging. We developed a tool kit for detecting contact sites based on fluorogen-activated bimolecular complementation at CONtact sites, FABCON, using a reversible, low-affinity split fluorescent protein, splitFAST. FABCON labels contact sites with minimal perturbation to organelle interaction. Via FABCON, we quantitatively demonstrated that endoplasmic reticulum (ER)- and mitochondria (mito)-lipid droplet contact sites are dynamic foci in distinct metabolic conditions, such as during lipid droplet biogenesis and consumption. An automated analysis pipeline further classified individual contact sites into distinct subgroups based on size, likely reflecting differential regulation and function. Moreover, FABCON is generalizable to visualize a repertoire of organelle contact sites including ER-mito. Altogether, FABCON reveals insights into the dynamic regulation of lipid droplet-organelle contact sites and generates new hypotheses for further mechanistical interrogation during metabolic regulation.

Indexed as

Endoplasmic ReticulumLipid DropletsMitochondriaFluorescent DyesHEK293 CellsHeLa CellsHumansLipid MetabolismLuminescent ProteinsFluorescent DyesLuminescent Proteins

Identifiers

PMID38949658
PMCPMC11215687

What Socratic holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.