Evidence map›Paper›PMID 38956021›Full record

ArticleNature communications2024

Cryo-EM unveils kinesin KIF1A's processivity mechanism and the impact of its pathogenic variant P305L.

Matthieu P M H Benoit, Lu Rao, Ana B Asenjo, Arne Gennerich, Hernando Sosa

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  14. Review
  15. Mechanism and regulation of kinesin motors.Nature reviews. Molecular cell biology · 2025
    Review
  16. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Matthieu P M H Benoit *Department of Biochemistry and Gruss-Lipper Biophotonics Center, Albert Einstein College of Medicine, Bronx, NY, 10461, USA. matthieu.benoit@univ-rennes.fr.ORCID 0000-0002-2880-7717
Lu Rao *Department of Biochemistry and Gruss-Lipper Biophotonics Center, Albert Einstein College of Medicine, Bronx, NY, 10461, USA.ORCID 0000-0002-7447-1484
Ana B AsenjoDepartment of Biochemistry and Gruss-Lipper Biophotonics Center, Albert Einstein College of Medicine, Bronx, NY, 10461, USA.ORCID 0000-0003-3752-9453
Arne GennerichDepartment of Biochemistry and Gruss-Lipper Biophotonics Center, Albert Einstein College of Medicine, Bronx, NY, 10461, USA. arne.gennerich@einsteinmed.edu.ORCID 0000-0002-8346-5473
Hernando SosaDepartment of Biochemistry and Gruss-Lipper Biophotonics Center, Albert Einstein College of Medicine, Bronx, NY, 10461, USA. hernando.sosa@einsteinmed.edu.ORCID 0000-0002-0483-5369

Funding

TRD #3: An automated and streamlined pipeline for in-situ molecular microscopyP41GM103310 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI DE MARCO, ALEX, KIEFT, JEFFREY S · 2012 to 2021
$14.7M
MECHANISM OF MICROTUBULE DYNAMICS REGULATION BY KINESINSR01GM113164 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI HERNANDO Jose SOSA · 2015 to 2026
$5.6M
MOLECULAR MECHANISM OF THE CYTOPLASMIC DYNEIN-DYNACTIN MOTOR COMPLEXR01GM098469 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI GENNERICH, ARNE · 2012 to 2025
$5.1M
Role of the Kinesin KIF1A in Neurological DiseaseR01NS114636 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CHUNG, WENDY K, GENNERICH, ARNE · 2020 to 2024
$3.2M
Structure and Mechanism of the Kinesin-3 Motor KIF1AR01GM147332 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI Arne Gennerich, HERNANDO Jose SOSA · 2023 to 2026
$2.5M
Acquisition of Detector for JEOL 3200 FSC Electron MicroscopeS10OD019994 · OD · NEW YORK STRUCTURAL BIOLOGY CENTER · PI CARRAGHER, BRIDGET OLIVIA · 2015 to 2015
$600k
Agouron Institute F00316NIGMS NIH HHS P41 GM103310NIGMS NIH HHS R01 GM098469NIGMS NIH HHS R01 GM113164NIGMS NIH HHS R01 GM147332NIH HHS S10 OD019994NINDS NIH HHS R01 NS114636Simmons Family Foundation SF349247U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) GM103310U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01GM113164U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01GM147332U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) R01NS114636
6 · The paper itself

Abstract

Mutations in the microtubule-associated motor protein KIF1A lead to severe neurological conditions known as KIF1A-associated neurological disorders (KAND). Despite insights into its molecular mechanism, high-resolution structures of KIF1A-microtubule complexes remain undefined. Here, we present 2.7-3.5 Å resolution structures of dimeric microtubule-bound KIF1A, including the pathogenic P305L mutant, across various nucleotide states. Our structures reveal that KIF1A binds microtubules in one- and two-heads-bound configurations, with both heads exhibiting distinct conformations with tight inter-head connection. Notably, KIF1A's class-specific loop 12 (K-loop) forms electrostatic interactions with the C-terminal tails of both α- and β-tubulin. The P305L mutation does not disrupt these interactions but alters loop-12's conformation, impairing strong microtubule-binding. Structure-function analysis reveals the K-loop and head-head coordination as major determinants of KIF1A's superprocessive motility. Our findings advance the understanding of KIF1A's molecular mechanism and provide a basis for developing structure-guided therapeutics against KAND.

Indexed as

Cryoelectron MicroscopyKinesinsMicrotubulesTubulinHumansModels, MolecularMutationProtein BindingProtein ConformationKIF1A protein, humanKinesinsTubulin

Identifiers

PMID38956021
PMCPMC11219953

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.