Evidence map›Paper›PMID 38980537›Full record

ArticleThe protein journal2024

Identification of Alternatively Spliced Novel Isoforms of Human HSPB8 Gene.

Naira Rashid, Pallavi Juneja, Akshat Rathi, Insha Sultan, Sayeed Ur Rehman

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Article in The protein journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Naira RashidDepartment of Biochemistry, School of Chemical and Life Sciences, Jamia Hamdard, New Delhi, 110062, India.
Pallavi JunejaDepartment of Biochemistry, School of Chemical and Life Sciences, Jamia Hamdard, New Delhi, 110062, India.
Akshat RathiDepartment of Biochemistry, School of Chemical and Life Sciences, Jamia Hamdard, New Delhi, 110062, India.
Insha SultanDepartment of Biochemistry, School of Chemical and Life Sciences, Jamia Hamdard, New Delhi, 110062, India.
Sayeed Ur RehmanDepartment of Biochemistry, School of Chemical and Life Sciences, Jamia Hamdard, New Delhi, 110062, India. sayeed125@gmail.com.

Funding

Central Council for Research in Unani Medicine [F.No.3-146/2017-CCRUM/Tech]Indian Council of Medical Research DHR-Women Scientist [No.R.12013/11/2021-HR/E-Office:8111598]
6 · The paper itself

Abstract

HSPB8 is a heat shock protein belonging to a family of ATP-independent stress proteins called HSPB which are present far and wide in the cells of various organisms. They are committed to protein quality control (PQC) and strive to avert protein aggregation and to procreate a pool of non-native proteins that can be swiftly folded. Their fundamental expression or stress inducibility is regulated by various cis-elements localized in the HSPB regulatory regions. In the current study we have predicted and confirmed two alternatively spliced novel transcripts of HSPB8 gene in liver, brain, and heart. These spliced variants have smaller sizes owing to smaller N terminal regions and showed remarkable changes in their cellular localization. Novel isoform (HSPB8-N1) was predicted to be majorly localized to nuclear region while the reported isoform (HSPB8) and one of the novel isoforms (HSPB8-N2) were predicted to be cytoplasmic in nature. There were many changes observed in the phosphorylation sites of the novel isoforms as well. The newly reported isoforms lack several structural motifs that are essential for various functional endeavors of the HSPB8 protein. In silico analysis of the conceptually translated protein was carried out using various bioinformatics tools to gain an understanding of their properties in order to explore their possible potential in therapeutics.

Indexed as

Alternative SplicingHeat-Shock ProteinsMolecular ChaperonesProtein IsoformsAmino Acid SequenceHumansHeat-Shock ProteinsHSPB8 protein, humanMolecular ChaperonesProtein IsoformsAlternative SplicingHSPB8IsoformsProtein CharacterizationSmall heat Shock Protein

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.