Evidence map›Paper›PMID 38988863›Full record

ArticleFrontiers in bioengineering and biotechnology2024

ML-driven segmentation of microvascular features during histological examination of tissue-engineered vascular grafts.

Viacheslav V Danilov, Vladislav V Laptev, Kirill Yu Klyshnikov, Alexander D Stepanov, Leo A Bogdanov, Larisa V Antonova, Evgenia O Krivkina, Anton G Kutikhin, Evgeny A Ovcharenko

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Article in Frontiers in bioengineering and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Viacheslav V DanilovPompeu Fabra University, Barcelona, Spain.
Vladislav V LaptevSiberian State Medical University, Tomsk, Russia.
Kirill Yu KlyshnikovResearch Institute for Complex Issues of Cardiovascular Diseases, Kemerovo, Russia.
Alexander D StepanovResearch Institute for Complex Issues of Cardiovascular Diseases, Kemerovo, Russia.
Leo A BogdanovResearch Institute for Complex Issues of Cardiovascular Diseases, Kemerovo, Russia.
Larisa V AntonovaResearch Institute for Complex Issues of Cardiovascular Diseases, Kemerovo, Russia.
Evgenia O KrivkinaResearch Institute for Complex Issues of Cardiovascular Diseases, Kemerovo, Russia.
Anton G KutikhinResearch Institute for Complex Issues of Cardiovascular Diseases, Kemerovo, Russia.
Evgeny A OvcharenkoResearch Institute for Complex Issues of Cardiovascular Diseases, Kemerovo, Russia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The development of next-generation tissue-engineered medical devices such as tissue-engineered vascular grafts (TEVGs) is a leading trend in translational medicine. Microscopic examination is an indispensable part of animal experimentation, and histopathological analysis of regenerated tissue is crucial for assessing the outcomes of implanted medical devices. However, the objective quantification of regenerated tissues can be challenging due to their unusual and complex architecture. To address these challenges, research and development of advanced ML-driven tools for performing adequate histological analysis appears to be an extremely promising direction. Methods: We compiled a dataset of 104 representative whole slide images (WSIs) of TEVGs which were collected after a 6-month implantation into the sheep carotid artery. The histological examination aimed to analyze the patterns of vascular tissue regeneration in TEVGs Results: After rigorous hyperparameter optimization, all six deep learning models achieved mean Dice Similarity Coefficients (DSC) exceeding 0.823. Notably, FPN and PSPNet exhibited the fastest convergence rates. MA-Net stood out with the highest mean DSC of 0.875, demonstrating superior performance in arteriole segmentation. DeepLabV3 performed well in segmenting venous and capillary structures, while FPN exhibited proficiency in identifying immune cells and nerve trunks. An ensemble of these three models attained an average DSC of 0.889, surpassing their individual performances. Conclusion: This study showcases the potential of ML-driven segmentation in the analysis of histological images of tissue-engineered vascular grafts. Through the creation of a unique dataset and the optimization of deep neural network hyperparameters, we developed and validated an ensemble model, establishing an effective tool for detecting key histological features essential for understanding vascular tissue regeneration. These advances herald a significant improvement in ML-assisted workflows for tissue engineering research and development.

Indexed as

deep learningdigital pathologyhistological segmentationtissue-engineered vascular graftsvascular tissue engineering

Identifiers

PMID38988863
PMCPMC11233802

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.