Evidence map›Paper›PMID 38995507›Full record

ArticleJournal of assisted reproduction and genetics2024

BCORL1, POF1B, and USP9X copy number variation in women with idiopathic diminished ovarian reserve.

Cristiana Libardi Miranda Furtado, Murilo Racy Soares, Carolina Gennari Verruma, Flavia Gaona de Oliveira Gennaro, Lilian Eslaine Costa Mendes da Silva, Rui Alberto Ferriani, Rosana Maria Dos Reis

Abstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Cristiana Libardi Miranda Furtado *Department of Gynecology and Obstetrics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil. clibardim@gmail.com.ORCID http://orcid.org/0000-0002-8711-8225
Murilo Racy Soares *Department of Gynecology and Obstetrics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.ORCID http://orcid.org/0000-0002-4190-495X
Carolina Gennari VerrumaDepartment of Gynecology and Obstetrics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.ORCID http://orcid.org/0000-0002-2373-1936
Flavia Gaona de Oliveira GennaroDepartment of Gynecology and Obstetrics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.ORCID http://orcid.org/0000-0001-6223-2198
Lilian Eslaine Costa Mendes da SilvaMultiuser Laboratory, Ribeirao Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.ORCID http://orcid.org/0000-0002-1673-264X
Rui Alberto FerrianiDepartment of Gynecology and Obstetrics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.ORCID http://orcid.org/0000-0001-9308-8344
Rosana Maria Dos ReisDepartment of Gynecology and Obstetrics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil. romareis@fmrp.usp.br.ORCID http://orcid.org/0000-0001-9631-4167

Funding

Institutos Nacionais de Ciência e Tecnologia (INCT) - Saúde da Mulher 176841/2022-9Institutos Nacionais de Ciência e Tecnologia, Saúde da Mulher 465482/2014-7
6 · The paper itself

Abstract

purposeTo analyze the copy number variation (CNV) in the X-linked genes BCORL1, POF1B, and USP9X in idiopathic diminished ovarian reserve (DOR).

methodsThis case-control study included 47 women, 26 with DOR and 21 in the control group. Age, weight, height, BMI, and FSH level were evaluated, as well as antral follicle count (AFC), oocyte retrieval after controlled ovarian stimulation, and metaphase II (MII) oocytes. The CNVs of BCORL1, USP9X, and POF1B genes were measured by quantitative real time PCR (qPCR) using two reference genes, the HPRT1 (X-linked) and MFN2 (autosomal). Protein-protein interaction network and functional enrichment analysis were performed using the STRING database.

resultsThe mean age was 36.52 ± 4.75 in DOR women and 35.38 ± 4.14 in control. Anthropometric measures did not differ between the DOR and control groups. DOR women presented higher FSH (p = 0.0025) and lower AFC (p < .0001), oocyte retrieval after COS (p = 0.0004), and MII oocytes (p < .0001) when compared to the control group. BCORL1 and POF1B did not differ in copy number between DOR and control. However, DOR women had more copies of USP9X than the control group (p = 0.028).

conclusionThe increase in the number of copies of the USP9X gene may lead to overexpression in idiopathic DOR and contribute to altered folliculogenesis and oocyte retrieval.

Indexed as

DNA Copy Number VariationsOvarian ReserveUbiquitin ThiolesteraseAdultCase-Control StudiesFemaleHumansOocyte RetrievalOocytesPrimary Ovarian InsufficiencyRepressor ProteinsRepressor ProteinsUbiquitin ThiolesteraseUSP9X protein, humanCopy number variationGenomic instability; Aging; DOROvarian failure

Identifiers

PMID38995507
PMCPMC11405560

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.