Evidence map›Paper›PMID 38998514›Full record

ArticleFoods (Basel, Switzerland)2024

RNA-Seq Reveals Pathways Responsible for Meat Quality Characteristic Differences between Two Yunnan Indigenous Chicken Breeds and Commercial Broilers.

Yong Liu, Xia Zhang, Kun Wang, Qihua Li, Shixiong Yan, Hongmei Shi, Lixian Liu, Shuangmin Liang, Min Yang, Zhengchang Su and 4 more

Abstract read
In one paragraph

Article in Foods (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Yong LiuYunnan Rural Revitalization Education Institute, Yunnan Open University, Kunming 650101, China.ORCID 0000-0001-5872-2231
Xia ZhangCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China.
Kun WangCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China.
Qihua LiCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China.
Shixiong YanYunnan Rural Revitalization Education Institute, Yunnan Open University, Kunming 650101, China.
Hongmei ShiYunnan Rural Revitalization Education Institute, Yunnan Open University, Kunming 650101, China.ORCID 0000-0003-2092-7375
Lixian LiuCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China.
Shuangmin LiangCollege of Food Science and Technology, Yunnan Agricultural University, Kunming 650201, China.
Min YangCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China.
Zhengchang SuDepartment of Bioinformatics and Genomics, College of Computing and Informatics, the University of North Carolina at Charlotte, Charlotte, NC 28223, USA.
Changrong GeCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China.
Junjing JiaCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China.
Zhiqiang XuCollege of Food Science and Technology, Yunnan Agricultural University, Kunming 650201, China.
Tengfei DouCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China.ORCID 0000-0003-2953-4869

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Poultry is a source of meat that is in great demand in the world. The quality of meat is an imperative point for shoppers. To explore the genes controlling meat quality characteristics, the growth and meat quality traits and muscle transcriptome of two indigenous Yunnan chicken breeds, Wuding chickens (WDs) and Daweishan mini chickens (MCs), were compared with Cobb broilers (CBs). The growth and meat quality characteristics of these two indigenous breeds were found to differ from CB. In particular, the crude fat (CF), inosine monophosphate content, amino acid (AA), and total fatty acid (TFA) content of WDs were significantly higher than those of CBs and MCs. In addition, it was found that MC pectoralis had 420 differentially expressed genes (DEGs) relative to CBs, and WDs had 217 DEGs relative to CBs. Among them, 105 DEGs were shared. The results of 10 selected genes were also confirmed by qPCR. The differentially expressed genes were six enriched Kyoto Encyclopedia of Genes and Genomes (KEGG) biological pathways including lysosomes, phagosomes, PPAR signaling pathways, cell adhesion molecules, cytokine-cytokine receptor interaction, and phagosome sphingolipid metabolism. Interestingly, four genes (

Indexed as

chickendifferentially expressed genesfat metabolismmeat quality characteristicsRNA-Seq

Identifiers

PMID38998514
PMCPMC11241438

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.