Evidence map›Paper›PMID 39007269›Full record

ArticleThe Journal of clinical investigation2024

Molecular analysis of primary and metastatic sites in patients with renal cell carcinoma.

Shuchi Gulati, Pedro C Barata, Andrew Elliott, Mehmet Asim Bilen, Earle F Burgess, Toni K Choueiri, Sourat Darabi, Nancy Ann Dawson, Benjamin Adam Gartrell, Hans J Hammers and 11 more

Abstract read
In one paragraph

Article in The Journal of clinical investigation, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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  16. Determinants of late metastases in renal cell carcinoma.Journal of the National Cancer Institute · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Shuchi GulatiUC Davis Comprehensive Cancer Center, Sacramento, California, USA.
Pedro C BarataUniversity Hospitals Seidman Cancer Center, Cleveland, Ohio, USA.
Andrew ElliottCaris Life Sciences, Irving, Texas, USA.
Mehmet Asim BilenEmory University School of Medicine, Atlanta, Georgia, USA.
Earle F BurgessLevine Cancer Institute, Charlotte, North Carolina, USA.
Toni K ChoueiriDana Farber Cancer Institute, Boston, Massachusetts, USA.
Sourat DarabiHoag Memorial Hospital Presbyterian, Newport Beach, California, USA.
Nancy Ann DawsonGeorgetown University Lombardi Comprehensive Cancer Center, Washington, DC, USA.
Benjamin Adam GartrellMontefiore Medical Center and Albert Einstein College of Medicine, New York, New York, USA.
Hans J HammersUT Southwestern Medical Center, Dallas, Texas, USA.
Elisabeth I HeathKarmanos Cancer Institute, Wayne State University School of Medicine, Detroit, Michigan, USA.
Daniel MageeCaris Life Sciences, Irving, Texas, USA.
Arpit RaoBaylor College of Medicine, Houston, Texas, USA.
Charles J RyanUniversity of Minnesota, Minneapolis, Minnesota, USA.
Przemyslaw TwardowskiSaint John's Cancer Institute at Providence Saint John's Health Center, Santa Monica, California, USA.
Shuanzeng WeiFox Chase Cancer Center, Philadelphia, Pennsylvania, USA.
James BrugarolasUT Southwestern Medical Center, Dallas, Texas, USA.
Tian ZhangUT Southwestern Medical Center, Dallas, Texas, USA.
Matthew R ZibelmanFox Chase Cancer Center, Philadelphia, Pennsylvania, USA.
Chadi NabhanCaris Life Sciences, Irving, Texas, USA.
Rana R McKayUniversity of California San Diego, La Jolla, California, USA.

Funding

University of Texas Southwestern Medical Center SPORE in Kidney CancerP50CA196516 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI James Brugarolas · 2016 to 2026
$24.7M
Physician Scientist Training in Cancer ResearchT32CA009172 · NCI · DANA-FARBER CANCER INSTITUTE · PI Jennifer R Brown, James A. DeCaprio · 1985 to 2026
$17.1M
Combination of Transcriptomic and Metallomic Biomarkers for Risk Assessment in Locoregional Clear Cell Renal Cell CarcinomaK08CA273542 · NCI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Shuchi Gulati · 2022 to 2026
$1.3M
NCI NIH HHS K08 CA273542NCI NIH HHS P50 CA196516NCI NIH HHS T32 CA009172
6 · The paper itself

Abstract

BACKGROUNDMetastases are the hallmark of lethal cancer, though underlying mechanisms that drive metastatic spread to specific organs remain poorly understood. Renal cell carcinoma (RCC) is known to have distinct sites of metastases, with lung, bone, liver, and lymph nodes being more common than brain, gastrointestinal tract, and endocrine glands. Previous studies have shown varying clinical behavior and prognosis associated with the site of metastatic spread; however, little is known about the molecular underpinnings that contribute to the differential outcomes observed by the site of metastasis.METHODSWe analyzed primary renal tumors and tumors derived from metastatic sites to comprehensively characterize genomic and transcriptomic features of tumor cells as well as to evaluate the tumor microenvironment at both sites.RESULTSWe included a total of 657 tumor samples (340 from the primary site [kidney] and 317 from various sites of metastasis). We show distinct genomic alterations, transcriptomic signatures, and immune and stromal tumor microenvironments across metastatic sites in a large cohort of patients with RCC.CONCLUSIONWe demonstrate significant heterogeneity among primary tumors and metastatic sites and elucidate the complex interplay between tumor cells and the extrinsic tumor microenvironment that is vital for developing effective anticancer therapies.

Indexed as

Carcinoma, Renal CellKidney NeoplasmsTumor MicroenvironmentAgedFemaleGene Expression Regulation, NeoplasticHumansMaleMiddle AgedNeoplasm MetastasisTranscriptomeCancerOncology

Identifiers

PMID39007269
PMCPMC11245151

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.