Evidence map›Paper›PMID 39012674›Full record

ArticleAging and disease2024

APOE 5'UTR Methylation Pattern Analysis in Blood and Brain Tissue from Alzheimer's Disease Affected Patients.

Rosalinda Di Gerlando, Francesca Dragoni, Bartolo Rizzo, Riccardo Rocco Ferrari, Elisabetta Zardini, Matteo Cotta Ramusino, Giulia Perini, Alfredo Costa, Tino Emanuele Poloni, Orietta Pansarasa and 2 more

Abstract read
In one paragraph

Article in Aging and disease, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Rosalinda Di GerlandoDepartment of Biology and Biotechnology "L. Spallanzani", University of Pavia, 27100 Pavia, Italy.
Francesca DragoniMolecular Biology and Transcriptomics Unit, IRCCS Mondino Foundation, 27100 Pavia, Italy.
Bartolo RizzoMolecular Biology and Transcriptomics Unit, IRCCS Mondino Foundation, 27100 Pavia, Italy.
Riccardo Rocco FerrariDepartment of Brain and Behavioral Sciences, University of Pavia, 27100 Pavia, Italy.
Elisabetta ZardiniDepartment of Brain and Behavioral Sciences, University of Pavia, 27100 Pavia, Italy.
Matteo Cotta RamusinoBehavioral Neurology Unit, IRCCS Mondino Foundation, 27100 Pavia, Italy.
Giulia PeriniBehavioral Neurology Unit, IRCCS Mondino Foundation, 27100 Pavia, Italy.
Alfredo CostaDepartment of Brain and Behavioral Sciences, University of Pavia, 27100 Pavia, Italy.
Tino Emanuele PoloniDepartment of Neurology and Neuropathology, Golgi-Cenci Foundation, 20081 Abbiategrasso, Italy.
Orietta PansarasaCellular Models and Neuroepigenetics Unit, IRCCS Mondino Foundation, 27100 Pavia, Italy.
Annalisa DavinLaboratory of Neurobiology and Neurogenetics, Golgi-Cenci Foundation, 20081 Abbiategrasso, Italy.
Stella GagliardiMolecular Biology and Transcriptomics Unit, IRCCS Mondino Foundation, 27100 Pavia, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

APOE ɛ4 allele is the major genetic risk factor for Alzheimer's Disease (AD). Furthermore, APOE methylation pattern has been described to be associated with the disease and to follow a bimodal pattern, with a hypermethylated CpG island and a hypomethylated promoter region. However, little is known about the methylation levels in the APOE 5'UTR region. Here, the methylation of two regions (R1 and R2) within APOE 5'UTR was investigated in both peripheral blood mononuclear cells (PBMCs) and hippocampus (HIC) samples to identify differentially methylated CpG sites and to associate clinical, genetic features and cerebrospinal fluid (CSF) biomarkers levels. DNA was extracted from PBMCs of 20 AD and 20 healthy controls (HC) and from 6 AD and 3 HC HIC samples. The methylation analysis was carried out by means of pyrosequencing. In AD PBMCs we found that R1 region displayed a higher methylation level, while the opposite trend was observed in R2. The presence of ɛ4 allele highlighted a marked increase in R1 methylation level and a decrease in R2. In AD PBMCs and HIC, age progression resulted to be associated with an increase in the methylation level of R1. Lastly, the methylation of a CpG site in R2 was found to be related to CSF biomarkers. Despite the lack of a statistical significance, the outcome from this exploratory analysis highlighted the presence of a difference in methylation in APOE 5'UTR in PBMCs of AD patients which seemed to be associated also with APOE genotype, age and CSF biomarkers level.

Indexed as

5' Untranslated RegionsAlzheimer DiseaseApolipoproteins EDNA MethylationHippocampusAgedAged, 80 and overBiomarkersCase-Control StudiesCpG IslandsFemaleHumansLeukocytes, MononuclearMaleMiddle Aged5' Untranslated RegionsApolipoproteins EBiomarkers

Identifiers

PMID39012674
PMCPMC12096928

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.