Evidence map›Paper›PMID 39017763›Full record

ArticleBiotechnology letters2024

A cell-free fluorescence biosensor based on allosteric transcription factor NalC for detection of pentachlorophenol.

Shuting Chen, Chen Zhao, Xiaodan Kang, Xi Zhang, Bin Xue, Chenyu Li, Shang Wang, Xiaobo Yang, Chao Li, Zhigang Qiu and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Biotechnology letters, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Shuting Chen *College of Food Science and Technology, Shanghai Ocean University, Shanghai, 201306, China.
Chen Zhao *Tianjin Institute of Environmental and Operational Medicine, Tianjin, 300050, China.
Xiaodan KangCollege of Food Science and Technology, Shanghai Ocean University, Shanghai, 201306, China.
Xi ZhangTianjin Institute of Environmental and Operational Medicine, Tianjin, 300050, China.
Bin XueTianjin Institute of Environmental and Operational Medicine, Tianjin, 300050, China.
Chenyu LiTianjin Institute of Environmental and Operational Medicine, Tianjin, 300050, China.
Shang WangTianjin Institute of Environmental and Operational Medicine, Tianjin, 300050, China.
Xiaobo YangTianjin Institute of Environmental and Operational Medicine, Tianjin, 300050, China.
Chao LiTianjin Institute of Environmental and Operational Medicine, Tianjin, 300050, China.
Zhigang QiuTianjin Institute of Environmental and Operational Medicine, Tianjin, 300050, China.
Jingfeng WangTianjin Institute of Environmental and Operational Medicine, Tianjin, 300050, China.
Zhiqiang ShenTianjin Institute of Environmental and Operational Medicine, Tianjin, 300050, China. tianjinszq922@sohu.com.ORCID http://orcid.org/0000-0001-8783-1795

Funding

Special Fund of China 040594Special Fund of China 21J001
6 · The paper itself

Abstract

Pentachlorophenol (PCP) was once used as a pesticide, germicide, and preservative due to its stable properties and resistance to degradation. This study aimed to design a biosensor for the quantitative and prompt detection of capable of PCP. A cell-free fluorescence biosensor was developed while employing NalC, an allosteric Transcription Factor responsive to PCP and In Vitro Transcription. By adding a DNA template and PCP and employing Electrophoretic Mobility Shift Assay while monitoring the dynamic fluorescence changes in RNA, this study offers evidence of NalC's potential applicability in sensor systems developed for the specific detection of PCP. The biosensor showed the capability for the quantitative detection of PCP, with a Limit of Detection (LOD) of 0.21 μM. Following the addition of Nucleic Acid Sequence-Based Amplification, the fluorescence intensity of RNA revealed an excellent linear relationship with the concentration of PCP, showing a correlation coefficient (R

Indexed as

Biosensing TechniquesPentachlorophenolCell-Free SystemFluorescenceLimit of DetectionTranscription FactorsPentachlorophenolTranscription FactorsCell-free biosensorsNalCNucleic acid sequence-based amplificationPentachlorophenol

Identifiers

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.