Evidence map›Paper›PMID 39021511›Full record

ArticleAdvances in neural information processing systems2023

CELL-E 2: Translating Proteins to Pictures and Back with a Bidirectional Text-to-Image Transformer.

Emaad Khwaja, Yun S Song, Aaron Agarunov, Bo Huang

Abstract read
PubMed Full text at PMC
In one paragraph

Article in Advances in neural information processing systems, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Emaad KhwajaUC Berkeley - UCSF Joint Bioengineering Graduate Program.
Yun S SongDepartment of Statistics, UC Berkeley, CA 94720.
Aaron AgarunovDepartment of Pathology, Memorial Sloan Kettering Cancer Center, 10065.
Bo HuangDepartment of Pharmaceutical Chemistry, UCSF, San Francisco, CA 94143.

Funding

Mapping endogenous protein dynamics in living cellsR01GM131641 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Bo Huang · 2019 to 2026
$2.6M
Robust and efficient statistical inference methods for genomicsR35GM134922 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI SONG, YUN S · 2020 to 2024
$2.0M
NIGMS NIH HHS R01 GM131641NIGMS NIH HHS R35 GM134922
6 · The paper itself

Abstract

We present CELL-E 2, a novel bidirectional transformer that can generate images depicting protein subcellular localization from the amino acid sequences (and

Identifiers

PMID39021511
PMCPMC11254339

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.