Evidence map›Paper›PMID 39026009›Full record

ArticleEMBO reports2024

Nup358 restricts ER-mitochondria connectivity by modulating mTORC2/Akt/GSK3β signalling.

Misha Kalarikkal, Rimpi Saikia, Lizanne Oliveira, Yashashree Bhorkar, Akshay Lonare, Pallavi Varshney, Prathamesh Dhamale, Amitabha Majumdar, Jomon Joseph

Abstract read
In one paragraph

Article in EMBO reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. PMF proteins mediate mitochondrial fusion in Arabidopsis.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Misha KalarikkalNational Centre for Cell Science, S.P. Pune University Campus, Pune, Maharashtra, 411007, India.
Rimpi SaikiaNational Centre for Cell Science, S.P. Pune University Campus, Pune, Maharashtra, 411007, India.ORCID 0000-0001-8317-9939
Lizanne OliveiraNational Centre for Cell Science, S.P. Pune University Campus, Pune, Maharashtra, 411007, India.ORCID 0009-0005-9649-0642
Yashashree BhorkarNational Centre for Cell Science, S.P. Pune University Campus, Pune, Maharashtra, 411007, India.
Akshay LonareNational Centre for Cell Science, S.P. Pune University Campus, Pune, Maharashtra, 411007, India.ORCID 0000-0001-9700-9869
Pallavi VarshneyNational Centre for Cell Science, S.P. Pune University Campus, Pune, Maharashtra, 411007, India.
Prathamesh DhamaleNational Centre for Cell Science, S.P. Pune University Campus, Pune, Maharashtra, 411007, India.ORCID 0000-0002-5074-5022
Amitabha MajumdarNational Centre for Cell Science, S.P. Pune University Campus, Pune, Maharashtra, 411007, India.ORCID 0000-0002-6594-0672
Jomon JosephNational Centre for Cell Science, S.P. Pune University Campus, Pune, Maharashtra, 411007, India. josephj@nccs.res.in.ORCID 0000-0002-3042-6286

Funding

Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
Department of Biotechnology, Ministry of Science and Technology, India (DBT) BT/PR27451/BRB/10/1655/2018DST | Science and Engineering Research Board (SERB) SPR/2021/000352HHS | National Institutes of Health (NIH) NIH P40OD018537NIH HHS P40 OD018537Pratiksha Trust Extra-Mural Support for Transformational Aging Brain Research (EMSTAR) EMSTAR/20230-03
6 · The paper itself

Abstract

ER-mitochondria contact sites (ERMCSs) regulate processes, including calcium homoeostasis, energy metabolism and autophagy. Previously, it was shown that during growth factor signalling, mTORC2/Akt gets recruited to and stabilizes ERMCSs. Independent studies showed that GSK3β, a well-known Akt substrate, reduces ER-mitochondria connectivity by disrupting the VAPB-PTPIP51 tethering complex. However, the mechanisms that regulate ERMCSs are incompletely understood. Here we find that annulate lamellae (AL), relatively unexplored subdomains of ER enriched with a subset of nucleoporins, are present at ERMCSs. Depletion of Nup358, an AL-resident nucleoporin, results in enhanced mTORC2/Akt activation, GSK3β inhibition and increased ERMCSs. Depletion of Rictor, a mTORC2-specific subunit, or exogenous expression of GSK3β, was sufficient to reverse the ERMCS-phenotype in Nup358-deficient cells. We show that growth factor-mediated activation of mTORC2 requires the VAPB-PTPIP51 complex, whereas, Nup358's association with this tether restricts mTORC2/Akt signalling and ER-mitochondria connectivity. Expression of a Nup358 fragment that is sufficient for interaction with the VAPB-PTPIP51 complex suppresses mTORC2/Akt activation and disrupts ERMCSs. Collectively, our study uncovers a novel role for Nup358 in controlling ERMCSs by modulating the mTORC2/Akt/GSK3β axis.

Indexed as

Endoplasmic ReticulumMitochondriaMolecular ChaperonesNuclear Pore Complex ProteinsSignal TransductionGlycogen Synthase Kinase 3Glycogen Synthase Kinase 3 betaHumansMechanistic Target of Rapamycin Complex 2Multiprotein ComplexesProto-Oncogene Proteins c-aktRapamycin-Insensitive Companion of mTOR ProteinTOR Serine-Threonine KinasesGlycogen Synthase Kinase 3Glycogen Synthase Kinase 3 betaGSK3B protein, humanMechanistic Target of Rapamycin Complex 2Molecular ChaperonesMultiprotein ComplexesNuclear Pore Complex ProteinsProto-Oncogene Proteins c-aktran-binding protein 2Rapamycin-Insensitive Companion of mTOR ProteinTOR Serine-Threonine KinasesAnnulate LamellaeER-mitochondria Contact SitesGSK3βmTORC2Nucleoporins

Identifiers

PMID39026009
PMCPMC11466962

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.