Evidence map›Paper›PMID 39042692›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Spatial molecular profiling of mixed invasive ductal and lobular breast cancers reveals heterogeneity in intrinsic molecular subtypes, oncogenic signatures, and mutations.

Osama Shiraz Shah, Azadeh Nasrazadani, Julia Foldi, Jennifer M Atkinson, Celina G Kleer, Priscilla F McAuliffe, Tyler J Johnston, Wayne Stallaert, Edaise M da Silva, Pier Selenica and 9 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Trial
  2. Review
  3. Article
  4. Pitfalls in the Histological Diagnosis of Morphologic Variants of Invasive Lobular Carcinoma of the Breast.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2025
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Contralateral breast cancer in patients carrying mutations in the BRCA1∕2 gene.Romanian journal of morphology and embryology = Revue roumaine de morphologie et embryologie
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors.

Osama Shiraz ShahWomens Cancer Research Center at University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center and Magee Women's Research Institute, Pittsburgh, PA 15213.ORCID 0000-0003-4756-4535
Azadeh NasrazadaniWomens Cancer Research Center at University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center and Magee Women's Research Institute, Pittsburgh, PA 15213.
Julia FoldiDivision of Hematology-Oncology, Department of Medicine, University of Pittsburgh, Pittsburgh, PA 15260.ORCID 0000-0002-7504-867X
Jennifer M AtkinsonWomens Cancer Research Center at University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center and Magee Women's Research Institute, Pittsburgh, PA 15213.
Celina G KleerDepartment of Pathology and Rogel Cancer Center, University of Michigan, Ann Arbor, MI 48109.ORCID 0000-0001-8195-185X
Priscilla F McAuliffeWomens Cancer Research Center at University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center and Magee Women's Research Institute, Pittsburgh, PA 15213.ORCID 0000-0002-2933-1191
Tyler J JohnstonDepartment of Computational and Systems Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213.ORCID 0009-0002-4780-9424
Wayne StallaertDepartment of Computational and Systems Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213.
Edaise M da SilvaDepartment of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065.ORCID 0000-0003-3281-7333
Pier SelenicaDepartment of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065.
Higinio DopesoDepartment of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065.ORCID 0000-0003-0060-1861
Fresia ParejaDepartment of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065.
Diana MandelkerDepartment of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065.
Britta WeigeltDepartment of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065.
Jorge S Reis-FilhoDepartment of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065.
Rohit BhargavaDepartment of Pathology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213.ORCID 0000-0002-1225-8418
Peter C LucasDepartment of Laboratory Medicine and Pathology, Mayo Clinic College of Medicine and Science, Rochester, MN 55902.ORCID 0000-0003-4880-7172
Adrian V LeeWomens Cancer Research Center at University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center and Magee Women's Research Institute, Pittsburgh, PA 15213.ORCID 0000-0001-9917-514X
Steffi OesterreichWomens Cancer Research Center at University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center and Magee Women's Research Institute, Pittsburgh, PA 15213.ORCID 0000-0002-2537-6923

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHRISTOPHER J. BAKKENIST · 1988 to 2026
$158.0M
Targeting Polθ to Overcome PARP Inhibitor Resistance in Homologous Recombination Deficient Breast CancerP50CA247749 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI Sarat Chandarlapaty, Simon N. Powell · 2020 to 2026
$16.3M
High-Throughput Computing for Genomics and Bioinformatics ResearchS10OD028483 · OD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEE, ADRIAN V · 2021 to 2021
$574k
American Society of Clinical Oncology (ASCO) xxxxxxxxxxxxxxBreast Cancer Research Foundation (BCRF) xxxxxxxxxxxxxxNCI NIH HHS P30 CA008748NCI NIH HHS P30 CA047904NCI NIH HHS P50 CA247749NIH HHS S10 OD028483The Dynami Foundation xxxxxxxxxxxxxx
6 · The paper itself

Abstract

Mixed invasive ductal and lobular carcinoma (MDLC) is a rare histologic subtype of breast cancer displaying both E-cadherin positive ductal and E-cadherin negative lobular morphologies within the same tumor, posing challenges with regard to anticipated clinical management. It remains unclear whether these distinct morphologies also have distinct biology and risk of recurrence. Our spatially resolved transcriptomic, genomic, and single-cell profiling revealed clinically significant differences between ductal and lobular tumor regions including distinct intrinsic subtype heterogeneity - e.g., MDLC with triple-negative breast cancer (TNBC) or basal ductal and estrogen receptor positive (ER+) luminal lobular regions, distinct enrichment of cell cycle arrest/senescence and oncogenic (ER and

Indexed as

Breast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, LobularMutationBiomarkers, TumorCadherinsFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansTranscriptomeTriple Negative Breast NeoplasmsBiomarkers, TumorCadherinsbreast cancermixed ductal–lobular carcinomasingle cell omicsspatial transcriptomicstumor heterogeneity

Identifiers

PMID39042692
PMCPMC11295029

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.