Evidence map›Paper›PMID 39043696›Full record

ArticleNature communications2024

Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.

Sanghyeon Choi, Youngjin Lee, Shinhye Park, Song Yee Jang, Jongbin Park, Do Won Oh, Su-Man Kim, Tae-Hwan Kim, Ga Seul Lee, Changyi Cho and 8 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Microorganisms · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Sanghyeon Choi *Department of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, 34141, Korea.ORCID 0000-0002-5445-0117
Youngjin Lee *Microbiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Korea.
Shinhye ParkMicrobiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Korea.
Song Yee JangMicrobiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Korea.
Jongbin ParkMicrobiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Korea.
Do Won OhMicrobiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Korea.
Su-Man KimMicrobiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Korea.
Tae-Hwan KimMicrobiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Korea.
Ga Seul LeeCore Research Facility & Analysis Center, KRIBB, Daejeon, 34141, Korea.
Changyi ChoDepartment of Food Science and Biotechnology, Ewha Womans University, Seoul, 03760, Korea.
Byoung Sik KimDepartment of Food Science and Biotechnology, Ewha Womans University, Seoul, 03760, Korea.ORCID 0000-0001-9820-6071
Donghan LeeKorea Basic Science Institute, Cheongju, Chungbuk, 28119, Korea.
Eun-Hee KimKorea Basic Science Institute, Cheongju, Chungbuk, 28119, Korea.
Hae-Kap CheongKorea Basic Science Institute, Cheongju, Chungbuk, 28119, Korea.
Jeong Hee MoonCore Research Facility & Analysis Center, KRIBB, Daejeon, 34141, Korea.ORCID 0000-0002-0119-7218
Ji-Joon SongDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, 34141, Korea.ORCID 0000-0001-7120-6311
Jungwon HwangMicrobiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Korea. jwhwang@kribb.re.kr.ORCID 0000-0002-4628-6177
Myung Hee KimMicrobiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Korea. mhk8n@kribb.re.kr.ORCID 0000-0003-2856-9066

Funding

Korea Research Institute of Bioscience and Biotechnology (KRIBB) KGM1382413Korea Research Institute of Bioscience and Biotechnology (KRIBB) KGM9942421National Research Foundation of Korea (NRF) 2021M3A9I4022934
6 · The paper itself

Abstract

Multiple bacterial genera take advantage of the multifunctional autoprocessing repeats-in-toxin (MARTX) toxin to invade host cells. Secretion of the MARTX toxin by Vibrio vulnificus, a deadly opportunistic pathogen that causes primary septicemia, the precursor of sepsis, is a major driver of infection; however, the molecular mechanism via which the toxin contributes to septicemia remains unclear. Here, we report the crystal and cryo-electron microscopy (EM) structures of a toxin effector duet comprising the domain of unknown function in the first position (DUF1)/Rho inactivation domain (RID) complexed with human targets. These structures reveal how the duet is used by bacteria as a potent weapon. The data show that DUF1 acts as a RID-dependent transforming NADase domain (RDTND) that disrupts NAD

Indexed as

Bacterial ToxinsCryoelectron MicroscopyVibrio vulnificusAnimalsCrystallography, X-RayFemaleHumansMiceNADNAD+ NucleosidaseProtein DomainsReactive Oxygen SpeciesSepsisVibrio InfectionsBacterial ToxinsNADNAD+ NucleosidaseReactive Oxygen Species

Identifiers

PMID39043696
PMCPMC11266601

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.