Evidence map›Paper›PMID 39045790›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2024

Novel insights into the phenotypic spectrum and pathogenesis of Hardikar syndrome.

Alanna Strong, Michael E March, Christopher J Cardinale, Yichuan Liu, Mark R Battig, Livia Sertori Finoti, Leticia S Matsuoka, Deborah Watson, Sindura Sridhar, James F Jarrett and 10 more

Abstract read
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Congenital Coarctation of the Aorta in a Patient WithAnnals of internal medicine. Clinical cases · 2026
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Alanna StrongDivision of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA; Center for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA; Department of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA. Electronic address: strong.alanna@gmail.com.
Michael E MarchCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
Christopher J CardinaleCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
Yichuan LiuCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
Mark R BattigCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
Livia Sertori FinotiCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
Leticia S MatsuokaCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
Deborah WatsonCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
Sindura SridharCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
James F JarrettCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
India CannonCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
Dong LiCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA.
Elizabeth BhojDivision of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA; Center for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA; Department of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA.
Elaine H ZackaiDivision of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA; Department of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA.
Elizabeth B RandDepartment of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA; Division of Gastroenterology and Hepatology, Children's Hospital of Philadelphia, Philadelphia, PA.
Tara WengerDivision of Genetic Medicine, University of Washington, Seattle, WA.
Bruce B LermanDepartment of Medicine, Division of Cardiology, Greenberg Institute for Cardiac Electrophysiology, Cornell University Medical Center, New York, NY.
Amy ShikanyDivision of Cardiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH.
K Nicole WeaverDivision of Human Genetics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH; Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH.
Hakon HakonarsonDivision of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA; Center for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA; Department of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA; Division of Pulmonary Medicine, Children's Hospital of Philadelphia, Philadelphia, PA. Electronic address: hakonarson@chop.edu.

Funding

Novel gene discovery in disorders of the liver and biliary treeK08DK128606 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI Alanna Strong · 2022 to 2026
$821k
NIDDK NIH HHS K08 DK128606
6 · The paper itself

Abstract

purposeHardikar syndrome (HS, MIM #301068) is a female-specific multiple congenital anomaly syndrome characterized by retinopathy, orofacial clefting, aortic coarctation, biliary dysgenesis, genitourinary malformations, and intestinal malrotation. We previously showed that heterozygous nonsense and frameshift variants in MED12 cause HS. The phenotypic spectrum of disease and the mechanism by which MED12 variants cause disease is unknown. We aim to expand the phenotypic and molecular landscape of HS and elucidate the mechanism by which MED12 variants cause disease.

methodsWe clinically assembled and molecularly characterized a cohort of 11 previously unreported individuals with HS. Additionally, we studied the effect of MED12 deficiency on ciliary biology, hedgehog, and yes-associated protein (YAP) signaling; pathways implicated in diseases with phenotypic overlap with HS.

resultsWe report novel phenotypes associated with HS, including cardiomyopathy, arrhythmia, and vascular anomalies, and expand the molecular landscape of HS to include splice site variants. We additionally demonstrate that MED12 deficiency causes decreased cell ciliation, and impairs hedgehog and YAP signaling.

conclusionOur data support updating HS standard-of-care to include regular cardiac imaging, arrhythmia screening, and vascular imaging. We further propose that dysregulation of ciliogenesis and YAP and hedgehog signaling contributes to the pathogenesis of HS.

Indexed as

Abnormalities, MultiplePhenotypeAdaptor Proteins, Signal TransducingAdolescentAdultAortic CoarctationChildChild, PreschoolCiliaFemaleHedgehog ProteinsHumansInfantMaleMediator ComplexMutationAdaptor Proteins, Signal TransducingHedgehog ProteinsMediator ComplexYAP1 protein, humanYAP-Signaling ProteinsCiliaHardikar syndromeHedgehogMED12YAP

Identifiers

PMID39045790
PMCPMC11456378

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.