Evidence map›Paper›PMID 39052671›Full record

ArticlePLoS genetics2024

Transcriptional programs of Pitx2 and Tfap2a/Tfap2b controlling lineage specification of mandibular epithelium during tooth initiation.

Fan Shao, An-Vi Phan, Wenjie Yu, Yuwei Guo, Jamie Thompson, Carter Coppinger, Shankar R Venugopalan, Brad A Amendt, Eric Van Otterloo, Huojun Cao

Abstract read
In one paragraph

Article in PLoS genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Mitochondrial transplant activates CaStem cell research & therapy · 2026
    Article
  4. Craniofacial developmental biology in the single-cell era.Development (Cambridge, England) · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Fan ShaoIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, Iowa City, Iowa, United States of America.ORCID https://orcid.org/0000-0001-7049-5166
An-Vi PhanIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, Iowa City, Iowa, United States of America.
Wenjie YuDepartment of Internal Medicine and Pappajohn Biomedical Institute, University of Iowa Carver College of Medicine, Iowa City, Iowa, United States of America.ORCID https://orcid.org/0000-0002-3013-1218
Yuwei GuoIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, Iowa City, Iowa, United States of America.
Jamie ThompsonDepartment of Anatomy and Cell Biology, University of Iowa Carver College of Medicine, Iowa City, Iowa, United States of America.
Carter CoppingerIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, Iowa City, Iowa, United States of America.
Shankar R VenugopalanIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, Iowa City, Iowa, United States of America.
Brad A AmendtIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, Iowa City, Iowa, United States of America.ORCID https://orcid.org/0000-0001-6524-1006
Eric Van OtterlooIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, Iowa City, Iowa, United States of America.ORCID https://orcid.org/0000-0001-5958-5742
Huojun CaoIowa Institute for Oral Health Research, University of Iowa College of Dentistry and Dental Clinics, Iowa City, Iowa, United States of America.ORCID https://orcid.org/0000-0003-4428-8686

Funding

Co-opting Lef-1 and miR-26b activities to regulate dental stem cells and their progenyR01DE028527 · NIDCR · UNIVERSITY OF IOWA · PI AMENDT, BRAD A, CAO, HUOJUN · 2020 to 2024
$2.1M
Identifying the core transcriptional regulatory network initiating a tooth programR01DE033009 · NIDCR · UNIVERSITY OF IOWA · PI Huojun Cao, Eric Van Otterloo · 2023 to 2026
$1.8M
Identification of Master Transcription Factors of Dental Epithelial Stem Cell by Computational MethodR21DE029828 · NIDCR · UNIVERSITY OF IOWA · PI CAO, HUOJUN · 2020 to 2021
$422k
Computational Method for Identification of Master Transcription Factors in Craniofacial TissuesR03DE028354 · NIDCR · UNIVERSITY OF IOWA · PI CAO, HUOJUN · 2019 to 2020
$309k
NIDCR NIH HHS R01 DE028527NIDCR NIH HHS R01 DE033009NIDCR NIH HHS R03 DE028354NIDCR NIH HHS R21 DE029828
6 · The paper itself

Abstract

How the dorsal-ventral axis of the vertebrate jaw, particularly the position of tooth initiation site, is established remains a critical and unresolved question. Tooth development starts with the formation of the dental lamina, a localized thickened strip within the maxillary and mandibular epithelium. To identify transcriptional regulatory networks (TRN) controlling the specification of dental lamina from the naïve mandibular epithelium, we utilized Laser Microdissection coupled low-input RNA-seq (LMD-RNA-seq) to profile gene expression of different domains of the mandibular epithelium along the dorsal-ventral axis. We comprehensively identified transcription factors (TFs) and signaling pathways that are differentially expressed along mandibular epithelial domains (including the dental lamina). Specifically, we found that the TFs Sox2 and Tfap2 (Tfap2a/Tfap2b) formed complimentary expression domains along the dorsal-ventral axis of the mandibular epithelium. Interestingly, both classic and novel dental lamina specific TFs-such as Pitx2, Ascl5 and Zfp536-were found to localize near the Sox2:Tfap2a/Tfap2b interface. To explore the functional significance of these domain specific TFs, we next examined loss-of-function mouse models of these domain specific TFs, including the dental lamina specific TF, Pitx2, and the ventral surface ectoderm specific TFs Tfap2a and Tfap2b. We found that disruption of domain specific TFs leads to an upregulation and expansion of the alternative domain's TRN. The importance of this cross-repression is evident by the ectopic expansion of Pitx2 and Sox2 positive dental lamina structure in Tfap2a/Tfap2b ectodermal double knockouts and the emergence of an ectopic tooth in the ventral surface ectoderm. Finally, we uncovered an unappreciated interface of mesenchymal SHH and WNT signaling pathways, at the site of tooth initiation, that were established by the epithelial domain specific TFs including Pitx2 and Tfap2a/Tfap2b. These results uncover a previously unknown molecular mechanism involving cross-repression of domain specific TFs including Pitx2 and Tfap2a/Tfap2b in patterning the dorsal-ventral axis of the mouse mandible, specifically the regulation of tooth initiation site.

Indexed as

Gene Expression Regulation, DevelopmentalHomeobox Protein PITX2Homeodomain ProteinsMandibleSOXB1 Transcription FactorsTranscription Factor AP-2Transcription FactorsAnimalsCell LineageEpitheliumGene Regulatory NetworksMiceOdontogenesisSignal TransductionToothHomeobox Protein PITX2Homeodomain ProteinsPitx2 protein, mouseSox2 protein, mouseSOXB1 Transcription FactorsTfap2a protein, mouseTfap2b protein, mouseTranscription Factor AP-2Transcription Factors

Identifiers

PMID39052671
PMCPMC11302917

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.