Evidence map›Paper›PMID 39069636›Full record

ArticleBMC musculoskeletal disorders2024

Identification of steroid-induced osteonecrosis of the femoral head biomarkers based on immunization and animal experiments.

Dongqiang Luo, Xiaolu Gao, Xianqiong Zhu, Jiayu Wu, Qingyi Yang, Ying Xu, Yuxuan Huang, Xiaolin He, Yan Li, Pengfei Gao

Abstract read
In one paragraph

Article in BMC musculoskeletal disorders, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  8. Drug design, development and therapy · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Dongqiang Luo *Nanfang College Guangzhou, Guangzhou, 510970, China.
Xiaolu Gao *Guangzhou University of Chinese Medicine, Guangzhou, 510006, China.
Xianqiong ZhuGuangzhou University of Chinese Medicine, Guangzhou, 510006, China.
Jiayu WuGuangzhou University of Chinese Medicine, Guangzhou, 510006, China.
Qingyi YangGuangzhou University of Chinese Medicine, Guangzhou, 510006, China.
Ying XuGuangzhou University of Chinese Medicine, Guangzhou, 510006, China.
Yuxuan HuangGuangdong Pharmaceutical University, Guangzhou, 510006, China.
Xiaolin HeClifford Hospital, Guangzhou, 511496, China.
Yan LiClifford Hospital, Guangzhou, 511496, China.
Pengfei GaoNanfang College Guangzhou, Guangzhou, 510970, China. 2504877459@qq.com.

Funding

Doctoral Initiation Projects of Nanfang College Guangzhou 2023BQ005Key Projects of Nanfang College Guangzhou 2023XK002
6 · The paper itself

Abstract

backgroundSteroid-induced osteonecrosis of femoral head (SONFH) is a severe health risk, and this study aims to identify immune-related biomarkers and pathways associated with the disease through bioinformatics analysis and animal experiments.

methodUsing SONFH-related datasets obtained from the GEO database, we performed differential expression analysis and weighted gene co-expression network analysis (WGCNA) to extract SONFH-related genes. A protein-protein interaction (PPI) network was then constructed, and core sub-network genes were identified. Immune cell infiltration and clustering analysis of SONFH samples were performed to assess differences in immune cell populations. WGCNA analysis was used to identify module genes associated with immune cells, and hub genes were identified using machine learning. Internal and external validation along with animal experiments were conducted to confirm the differential expression of hub genes and infiltration of immune cells in SONFH.

resultsDifferential expression analysis revealed 502 DEGs. WGCNA analysis identified a blue module closely related to SONFH, containing 1928 module genes. Intersection analysis between DEGs and blue module genes resulted in 453 intersecting genes. The PPI network and MCODE module identified 15 key targets enriched in various signaling pathways. Analysis of immune cell infiltration showed statistically significant differences in CD8 + t cells, monocytes, macrophages M2 and neutrophils between SONFH and control samples. Unsupervised clustering classified SONFH samples into two clusters (C1 and C2), which also exhibited significant differences in immune cell infiltration. The hub genes (ICAM1, NR3C1, and IKBKB) were further identified using WGCNA and machine learning analysis. Based on these hub genes, a clinical prediction model was constructed and validated internally and externally. Animal experiments confirmed the upregulation of hub genes in SONFH, with an associated increase in immune cell infiltration.

conclusionThis study identified ICAM1, NR3C1, and IKBKB as potential immune-related biomarkers involved in immune cell infiltration of CD8 + t cells, monocytes, macrophages M2, neutrophils and other immune cells in the pathogenesis of SONFH. These biomarkers act through modulation of the chemokine signaling pathway, Toll-like receptor signaling pathway, and other pathways. These findings provide valuable insights into the disease mechanism of SONFH and may aid in future drug development efforts.

Indexed as

Femur Head NecrosisProtein Interaction MapsAnimalsBiomarkersComputational BiologyDisease Models, AnimalGene Expression ProfilingGene Regulatory NetworksHumansMachine LearningMaleMiceSignal TransductionSteroidsBiomarkersSteroidsAnimal experimentsFemoral headImmunizationOsteonecrosisSteroid-induced

Identifiers

PMID39069636
PMCPMC11285486

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.