Evidence map›Paper›PMID 39077866›Full record

ArticleAlzheimer's & dementia : the journal of the Alzheimer's Association2024

A genetic and proteomic comparison of key AD biomarkers across tissues.

Thomas W Marsh, Daniel Western, Jigyasha Timsina, Priyanka Gorijala, Chengran Yang, Pau Pastor, Menghan Liu, John C Morris, Randall J Bateman, Suzanne E Schindler and 3 more

Abstract readComparative Study
In one paragraph

Article in Alzheimer's & dementia : the journal of the Alzheimer's Association, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Proteogenomics in human populations.Nature reviews. Genetics · 2026
    Review
  2. Review
  3. Single-Cell Transcriptomic Profiling of Brain Cells in Newborn Rats Following Hypoxic Ischemic Encephalopathy.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  4. A genetic and proteomic comparison of key AD biomarkers across tissues.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Thomas W MarshDivision of Biology & Biomedical Sciences, Washington University in St. Louis, St. Louis, Missouri, USA.ORCID 0000-0001-8565-3788
Daniel WesternDivision of Biology & Biomedical Sciences, Washington University in St. Louis, St. Louis, Missouri, USA.
Jigyasha TimsinaDepartment of Psychiatry, Washington University in St. Louis, St. Louis, Missouri, USA.
Priyanka GorijalaDivision of Biology & Biomedical Sciences, Washington University in St. Louis, St. Louis, Missouri, USA.
Chengran YangDepartment of Psychiatry, Washington University in St. Louis, St. Louis, Missouri, USA.
Pau PastorUnit of Neurodegenerative diseases, Department of Neurology, University Hospital Germans Trias i Pujol and The Germans Trias i Pujol Research Institute (IGTP) Badalona, Barcelona, Spain.
Menghan LiuDepartment of Psychiatry, Washington University in St. Louis, St. Louis, Missouri, USA.
John C MorrisKnight Alzheimer's Disease Research Center, Washington University in St. Louis, St. Louis, Missouri, USA.
Randall J BatemanDepartment of Neurology, Washington University in St Louis, St Louis, Missouri, USA.
Suzanne E SchindlerDepartment of Neurology, Washington University in St Louis, St Louis, Missouri, USA.
Yun Ju SungDepartment of Psychiatry, Washington University in St. Louis, St. Louis, Missouri, USA.
Dominantly Inherited Alzheimer NetworkDominantly Inherited Alzheimer Network (DIAN), Washington University in St. Louis, St. Louis, Missouri, USA.
Carlos CruchagaDepartment of Psychiatry, Washington University in St. Louis, St. Louis, Missouri, USA.ORCID 0000-0002-0276-2899

Funding

Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
Smartphone-Based "Burst" Cognitive AssessmentsP01AG003991 · NIA · WASHINGTON UNIVERSITY · PI JOHN MORRIS · 1985 to 2026
$69.5M
Imaging CoreU19AG032438 · NIA · WASHINGTON UNIVERSITY · PI BATEMAN, RANDALL J · 2010 to 2025
$53.9M
The natural history of AB accumulation in preclinical ADP01AG026276 · NIA · WASHINGTON UNIVERSITY · PI MORRIS, JOHN · 2005 to 2025
$49.5M
Stanford Alzheimer's Disease Research CenterAdmin Supp: Developing iPSC models for AD and PDP30AG066515 · NIA · STANFORD UNIVERSITY · PI Lisa Goldman Rosas · 2020 to 2026
$29.0M
Research Education ComponentP30AG066444 · NIA · WASHINGTON UNIVERSITY · PI Susan Lynn Stark · 2020 to 2026
$28.7M
Human White Matter Tract Mapping by Diffusion MRIR01AG020012 · NIA · JOHNS HOPKINS UNIVERSITY · PI MORI, SUSUMU · 2001 to 2011
$4.1M
USING QUANTITATIVE TRAITS TO IDENTIFY NOVEL GENES FOR ALZHEIMERS DISEASE AND OTHER COMPLEX TRAITSRF1AG053303 · NIA · WASHINGTON UNIVERSITY · PI CLIMER, SHARLEE, CRUCHAGA, CARLOS · 2016 to 2020
$4.0M
GENETIC MODIFIERS OF CEREBROSPINAL FLUID TREM2 IN ALZHEIMER'S DISEASERF1AG058501 · NIA · WASHINGTON UNIVERSITY · PI CRUCHAGA, CARLOS, PICCIO, LAURA · 2018 to 2018
$3.5M
The Familial Alzheimer Sequencing (FASe) ProjectU01AG058922 · NIA · WASHINGTON UNIVERSITY · PI CRUCHAGA, CARLOS, GOATE, ALISON M · 2018 to 2022
$3.5M
Sex-specific Molecular Profiling to Understand Pathology and Identify Causal Genes and Drug Targets for Alzheimer's DiseaseRF1AG074007 · NIA · WASHINGTON UNIVERSITY · PI SUNG, YUNJU · 2021 to 2021
$2.7M
IDENTIFYING RARE VARIANTS THAT INCREASE RISK FOR ALZHEIMER'S DISEASER01AG044546 · NIA · WASHINGTON UNIVERSITY · PI CRUCHAGA, CARLOS · 2013 to 2017
$2.7M
AbbVieAlzheimer Drug Discovery FoundationAlzheimer NederlandAlzheimer's Association SG-20-690363Alzheimer's Association Zenith Fellows Award ZEN-22-848604Alzheimer's Disease Neuroimaging Initiative W81XWH-12-2-0012Araclon BiotechBioClinica Inc.BiogenBrain Canada FoundationBright Focus Foundation A2021033SBristol-Myers Squibb CompanyCereSpir Inc.Chan Zuckerberg InitiativeComunidad de Maddrid 2018-T2/BMD-14885Department of Defense LI- W81XWH2010849Dominantly Inherited Alzheimer Network U19AG032438Eisai Inc.Elan Pharmaceuticals Inc.Eli Lilly and CompanyEPND 101034344EuroImmunEuropean Commission 831434European Commission 860197F. Hoffman-La Roche LtdFonds de Recherche du Québec SantéFujirebioGE HealthcareGenentech Inc.Gieskes-StrijbisfondsGlaxoSmithKline P01AG026276GlaxoSmithKline P01AG03991GlaxoSmithKline P30AG066444Health∼HollandInnovative Medicines Initiatives 3TR 831434IXICO Ltd.Janssen Alzheimer Immunotherapy Research and Development, LLCJohnson & Johnson Pharmaceutical Research and Development, LLC.LumosityLundbeckMerck & Co. Inc.Meso Scale Diagnostics LLCMichael J. Fox FoundationMinisterio Español de Ciencia e innovación PID2020-115613RA-I00NeuroRx ResearchNeurotrack TechnologiesNIA NIH HHS P01 AG003991NIA NIH HHS P01 AG026276NIA NIH HHS P30 AG066444NIA NIH HHS P30 AG066515NIA NIH HHS R00 AG062723NIA NIH HHS R01 AG044546NIA NIH HHS RF1 AG053303NIA NIH HHS RF1 AG058501NIA NIH HHS RF1 AG074007NIA NIH HHS U01 AG024904NIA NIH HHS U01 AG058922NIA NIH HHS U19 AG032438NIBIB NIH HHSNIH HHS P01AG003991NIH HHS P01AG026276NIH HHS P30AG066444NIH HHS P30 AG066515NIH HHS R00AG062723NIH HHS R01AG044546NIH HHS RF1AG053303NIH HHS RF1AG058501NIH HHS RF1AG074007NIH HHS U01AG058922Novartis Pharmaceuticals CorporationPfizer Inc.Piramal ImagingSelfridges Group Foundation NR170065ServierTakeda Pharmaceutical CompantTopsector Life Sciences & Health LSHM20106Transition TherapeuticsWashU Departments of Neurology and PsychiatryZonMw 73305095007
6 · The paper itself

Abstract

introductionPlasma has been proposed as an alternative to cerebrospinal fluid (CSF) for measuring Alzheimer's disease (AD) biomarkers, but no studies have analyzed in detail which biofluid is more informative for genetics studies of AD.

methodEleven proteins associated with AD (α-synuclein, apolipoprotein E [apoE], CLU, GFAP, GRN, NfL, NRGN, SNAP-25, TREM2, VILIP-1, YKL-40) were assessed in plasma (n = 2317) and CSF (n = 3107). Both plasma and CSF genome-wide association study (GWAS) analyses were performed for each protein, followed by functional annotation. Additional characterization for each biomarker included calculation of correlations and predictive power.

resultsEighteen plasma protein quantitative train loci (pQTLs) associated with 10 proteins and 16 CSF pQTLs associated with 9 proteins were identified. Plasma and CSF shared some genetic loci, but protein levels between tissues correlated weakly. CSF protein levels better associated with AD compared to plasma. DISCUSSION: The present results indicate that CSF is more informative than plasma for genetic studies in AD. HIGHLIGHTS: The identification of novel protein quantitative trait loci (pQTLs) in both plasma and cerebrospinal fluid (CSF). Plasma and CSF levels of neurodegeneration-related proteins correlated weakly. CSF is more informative than plasma for genetic studies of Alzheimer's disease (AD). Neurofilament light (NfL), triggering receptor expressed on myeloid cells 2 (TREM2), and chitinase-3-like protein 1 (YKL-40) tend to show relatively strong inter-tissue associations. A novel signal in the apolipoprotein E (APOE) region was identified, which is an eQTL for APOC1.

Indexed as

Alzheimer DiseaseBiomarkersGenome-Wide Association StudyProteomicsAgedFemaleHumansMaleQuantitative Trait LociBiomarkersAlzheimer's diseasebiomarkersCSFgenomicsneurodegenerative diseaseplasmaprotein quantitative trait loci

Identifiers

PMID39077866
PMCPMC11633343

What Socratic holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.