Evidence map›Paper›PMID 39083206›Full record

ArticleJournal of veterinary science2024

Comparative proteomic analysis of PK-15 cells infected with wild-type strain and its EP0 gene-deleted mutant strain of pseudorabies virus.

Di Wang, Dongjie Chen, Shengkui Xu, Fang Wei, Hongyuan Zhao

Abstract readComparative Study
In one paragraph

Article in Journal of veterinary science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Di WangSchool of Agroforestry and Medicine, The Open University of China, Beijing 100039, China.ORCID https://orcid.org/0009-0002-9587-9507
Dongjie ChenInstitute of Animal Inspection and Quarantine, Chinese Academy of Inspection and Quarantine, Beijing 100176, China. chendongjie1212@163.com.ORCID https://orcid.org/0000-0002-0651-6708
Shengkui XuCollege of Animal Science and Technology, Beijing University of Agriculture, Beijing 102206, China.ORCID https://orcid.org/0009-0001-1819-2878
Fang WeiInstitute of Animal Inspection and Quarantine, Chinese Academy of Inspection and Quarantine, Beijing 100176, China.ORCID https://orcid.org/0009-0009-3298-575X
Hongyuan ZhaoSchool of Modern Agriculture & Biotechnology, Ankang University, Ankang 725000, China. zhaohongyuan18@163.com.ORCID https://orcid.org/0009-0004-3537-9994

Funding

China National Key R&D Program 2023YFF0614402National Natural Science Foundation of China 31902302
6 · The paper itself

Abstract

importanceAs one of the main etiologic agents of infectious diseases in pigs, pseudorabies virus (PRV) infections have caused enormous economic losses worldwide. EP0, one of the PRV early proteins (EP) plays a vital role in PRV infections, but the mechanisms are unclear.

objectiveThis study examined the function of EP0 to provide a direction for its in-depth analysis.

methodsIn this study, the EP0-deleted PRV mutant was obtained, and Tandem Mass Tag-based proteomic analysis was used to screen the differentially expressed proteins (DEPs) quantitatively in EP0-deleted PRV- or wild-type PRV-infected porcine kidney 15 cells.

resultsThis study identified 7,391 DEPs, including 120 and 21 up-regulated and down-regulated DEPs, respectively. Western blot analysis confirmed the changes in the expression of the selected proteins, such as speckled protein 100. Comprehensive analysis revealed 141 DEPs involved in various biological processes and molecular functions, such as transcription regulator activity, biological regulation, and localization. CONCLUSIONS AND RELEVANCE: These results holistically outlined the functions of EP0 during a PRV infection and might provide a direction for more detailed function studies of EP0 and the stimulation of lytic PRV infections.

Indexed as

Herpesvirus 1, SuidProteomicsAnimalsCell LineGene DeletionProteomePseudorabiesSwineSwine DiseasesViral ProteinsProteomeViral Proteinsgene ontologyproteomicsPseudorabies virusreverse geneticsSp100

Identifiers

PMID39083206
PMCPMC11291433

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.