Evidence map›Paper›PMID 39085378›Full record

ArticleScientific reports2024

Atomic insights into the signaling landscape of E. coli PhoQ histidine kinase from molecular dynamics simulations.

Symela Lazaridi, Jing Yuan, Thomas Lemmin

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Symela LazaridiInstitute of Biochemistry and Molecular Medicine (IBMM), University of Bern, Bühlstrasse 28, 3012, Bern, Switzerland.ORCID 0009-0003-3323-7215
Jing YuanMax Planck Institute for Terrestrial Microbiology and Center for Synthetic Microbiology, Karl-Von-Frisch-Strasse 14, 35043, Marburg, Germany.ORCID 0000-0003-1219-3316
Thomas LemminInstitute of Biochemistry and Molecular Medicine (IBMM), University of Bern, Bühlstrasse 28, 3012, Bern, Switzerland. thomas.lemmin@unibe.ch.ORCID 0000-0001-5705-4964

Funding

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung,Switzerland PCEFP3_194606
6 · The paper itself

Abstract

Bacteria rely on two-component systems to sense environmental cues and regulate gene expression for adaptation. The PhoQ/PhoP system exemplifies this crucial role, playing a key part in sensing magnesium (Mg

Indexed as

Escherichia coliEscherichia coli ProteinsMagnesiumMolecular Dynamics SimulationSignal TransductionHistidine KinaseProtein ConformationEscherichia coli ProteinsHistidine KinaseMagnesiumPhoQ protein, E coli

Identifiers

PMID39085378
PMCPMC11291726

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.