Evidence map›Paper›PMID 39088119›Full record

ArticleMicrobial ecology2024

Exploring the Influence of Date Palm Cultivars on Soil Microbiota.

Pedro Ferreira, Mohamed Ali Benabderrahim, Hammadi Hamza, Alexis Marchesini, Mokhtar Rejili, Joana Castro, Rui M Tavares, Daniela Costa, Federico Sebastiani, Teresa Lino-Neto

Abstract read
In one paragraph

Article in Microbial ecology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Pedro FerreiraCentre of Molecular and Environmental Biology (CBMA), Department of Biology, University of Minho, Campus of Gualtar, 4710-057, Braga, Portugal.ORCID http://orcid.org/0000-0003-3288-5096
Mohamed Ali BenabderrahimFaculty of Sciences of Tunis, Department of Biology, University of Tunis EL Manar, 2092, Tunis, Tunisia.ORCID http://orcid.org/0000-0002-0867-0995
Hammadi HamzaDrylands and Oases Cropping Laboratory. Arid Areas Institute (IRA), 4119, Medenine, Tunisia.ORCID http://orcid.org/0000-0003-1076-4891
Alexis MarchesiniInstitute for Sustainable Plant Protection, National Research Council, Via Madonna del Piano 10, 50019, Sesto Fiorentino, FI, Italy.ORCID http://orcid.org/0000-0001-9487-5737
Mokhtar RejiliDepartment of Life Sciences, Al Imam Mohamed Ibn Saud Islamic University (IMSIU), 11623, Riyadh, Saudi Arabia.
Joana CastroCentre of Molecular and Environmental Biology (CBMA), Department of Biology, University of Minho, Campus of Gualtar, 4710-057, Braga, Portugal.ORCID http://orcid.org/0000-0003-4712-074X
Rui M TavaresCentre of Molecular and Environmental Biology (CBMA), Department of Biology, University of Minho, Campus of Gualtar, 4710-057, Braga, Portugal.ORCID http://orcid.org/0000-0002-1702-256X
Daniela CostaCentre of Molecular and Environmental Biology (CBMA), Department of Biology, University of Minho, Campus of Gualtar, 4710-057, Braga, Portugal.ORCID http://orcid.org/0000-0001-8398-3580
Federico SebastianiInstitute for Sustainable Plant Protection, National Research Council, Via Madonna del Piano 10, 50019, Sesto Fiorentino, FI, Italy.ORCID http://orcid.org/0000-0003-4676-7381
Teresa Lino-NetoCentre of Molecular and Environmental Biology (CBMA), Department of Biology, University of Minho, Campus of Gualtar, 4710-057, Braga, Portugal. tlneto@bio.uminho.pt.ORCID http://orcid.org/0000-0002-1385-4799

Funding

Fundação para a Ciência e a Tecnologia 2019-SECTION2-15; PRIMA/0001/2019
6 · The paper itself

Abstract

Plants thrive in diverse environments, where root-microbe interactions play a pivotal role. Date palm (Phoenix dactylifera L.), with its genetic diversity and resilience, is an ideal model for studying microbial adaptation to different genotypes and stresses. This study aimed to analyze the bacterial and fungal communities associated with traditional date palm cultivars and the widely cultivated "Deglet Nour" were explored using metabarcoding approaches. The microbial diversity analysis identified a rich community with 13,189 bacterial and 6442 fungal Amplicon Sequence Variants (ASVs). Actinobacteriota, Proteobacteria, and Bacteroidota dominated bacterial communities, while Ascomycota dominated fungal communities. Analysis of the microbial community revealed the emergence of two distinct clusters correlating with specific date palm cultivars, but fungal communities showed higher sensitivity to date palm genotype variations compared to bacterial communities. The commercial cultivar "Deglet Nour" exhibited a unique microbial composition enriched in pathogenic fungal taxa, which was correlated with its genetic distance. Overall, our study contributes to understanding the complex interactions between date palm genotypes and soil microbiota, highlighting the genotype role in microbial community structure, particularly among fungi. These findings suggest correlations between date palm genotype, stress tolerance, and microbial assembly, with implications for plant health and resilience. Further research is needed to elucidate genotype-specific microbial interactions and their role in enhancing plant resilience to environmental stresses.

Indexed as

BacteriaFungiMicrobiotaPhoeniceaeSoil MicrobiologyGenotypePlant RootsSoilSoilCultivarsPhoenix dactylifera L.Plant toleranceSoil microbiomeSustainability

Identifiers

PMID39088119
PMCPMC11294395

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.