Evidence map›Paper›PMID 39099731›Full record

ArticleBiological psychiatry global open science2024

11.7T Diffusion Magnetic Resonance Imaging and Tractography to Probe Human Brain Organoid Microstructure.

Amelia Versace, T Kevin Hitchens, Callen T Wallace, Simon C Watkins, Leonardo D'Aiuto

Abstract read
In one paragraph

Article in Biological psychiatry global open science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. A genetic reporter for visualizing nitroreductase activity using magnetic resonance imaging.Chemistry methods : new approaches to solving problems in chemistry · 2026
    Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Amelia VersaceUniversity of Pittsburgh Department of Psychiatry, Pittsburgh, Pennsylvania.
T Kevin HitchensUniversity of Pittsburgh Department of Neurobiology, Pittsburgh, Pennsylvania.
Callen T WallaceUniversity of Pittsburgh Department of Cell Biology, Pittsburgh, Pennsylvania.
Simon C WatkinsUniversity of Pittsburgh Department of Cell Biology, Pittsburgh, Pennsylvania.
Leonardo D'AiutoUniversity of Pittsburgh Department of Psychiatry, Pittsburgh, Pennsylvania.

Funding

Response Evaluation of Acute Cortisol in mTBI (REACT)R01MH114881 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Anthony P Kontos, Amelia Versace · 2018 to 2026
$6.2M
Neurodevelopment of Emotional Interference Resistance in Adolescence to Adulthood: A Multimodal Neuroimaging ApproachR01MH128229 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Neil Patrick Jones, Cecile D. Ladouceur · 2022 to 2026
$3.7M
Effects of HSV-1 reactivation from latency on aspects of neural precursor cells neurogenesis and accumulation of Alzheimer's molecular hallmarksR01NS115082 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BLOOM, DAVID C., D'AIUTO, LEONARDO · 2020 to 2024
$2.3M
Analysis of human-specific aspects of HSV-1 latency in human iPSC-derived neuronsR21NS096405 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI D'AIUTO, LEONARDO · 2016 to 2017
$428k
NIMH NIH HHS R01 MH114881NIMH NIH HHS R01 MH128229NINDS NIH HHS R01 NS115082NINDS NIH HHS R21 NS096405
6 · The paper itself

Abstract

Background: Human brain organoids are 3-dimensional cellular models that mimic architectural features of a developing brain. Generated from human induced pluripotent stem cells, these organoids offer an unparalleled physiologically relevant in vitro system for disease modeling and drug screening. In the current study, we sought to establish a foundation for a magnetic resonance imaging (MRI)-based, label-free imaging system that offers high-resolution capabilities for deep tissue imaging of whole organoids. Methods: An 11.7T Bruker/89 mm microimaging system was used to collect high-resolution multishell 3-dimensional diffusion images of 2 induced pluripotent stem cell-derived human hippocampal brain organoids. The MRI features identified in the study were interpreted on the basis of similarities with immunofluorescence microscopy. Results: MRI microscopy at ≤40 μm isotropic resolution provided a 3-dimensional view of organoid microstructure. T2-weighted contrast showed a rosette-like internal structure and a protruding spherical structure that correlated with immunofluorescence staining for the choroid plexus. Diffusion tractography methods can be used to model tissue microstructural features and possibly map neuronal organization. This approach complements traditional immunohistochemistry imaging methods without the need for tissue clearing. Conclusions: This proof-of-concept study shows, for the first time, the application of high-resolution diffusion MRI microscopy to image 2-mm diameter spherical human brain organoids. Application of ultrahigh-field MRI and diffusion tractography is a powerful modality for whole organoid imaging and has the potential to make a significant impact for probing microstructural changes in brain organoids used to model psychiatric disorders, neurodegenerative diseases, and viral infections of the human brain, as well as for assessing neurotoxicity in drug screening.

Indexed as

Differentiating rosette-like structuresDiffusion imaging microscopyHigh-field MRIHuman brain organoidsHuman induced pluripotent stem cellsNeuronal streamlines

Identifiers

PMID39099731
PMCPMC11295450

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.