Evidence map›Paper›PMID 39105171›Full record

ArticleFrontiers in cell and developmental biology2024

Effective mechanical potential of cell-cell interaction in tissues harboring cavity and in cell sheet toward morphogenesis.

Hiroshi Koyama, Hisashi Okumura, Tetsuhisa Otani, Atsushi M Ito, Kazuyuki Nakamura, Kagayaki Kato, Toshihiko Fujimori

Abstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hiroshi KoyamaDivision of Embryology, National Institute for Basic Biology, Okazaki, Aichi, Japan.
Hisashi OkumuraSOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi, Japan.
Tetsuhisa OtaniSOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi, Japan.
Atsushi M ItoNational Institute for Fusion Science, National Institutes of Natural Sciences, Gifu, Japan.
Kazuyuki NakamuraSchool of Interdisciplinary Mathematical Sciences, Meiji University, Tokyo, Japan.
Kagayaki KatoSOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi, Japan.
Toshihiko FujimoriDivision of Embryology, National Institute for Basic Biology, Okazaki, Aichi, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Measuring mechanical forces of cell-cell interactions is important for studying morphogenesis in multicellular organisms. We previously reported an image-based statistical method for inferring effective mechanical potentials of pairwise cell-cell interactions by fitting cell tracking data with a theoretical model. However, whether this method is applicable to tissues with non-cellular components such as cavities remains elusive. Here we evaluated the applicability of the method to cavity-harboring tissues. Using synthetic data generated by simulations, we found that the effect of expanding cavities was added to the pregiven potentials used in the simulations, resulting in the inferred effective potentials having an additional repulsive component derived from the expanding cavities. Interestingly, simulations by using the effective potentials reproduced the cavity-harboring structures. Then, we applied our method to the mouse blastocysts, and found that the inferred effective potentials can reproduce the cavity-harboring structures. Pairwise potentials with additional repulsive components were also detected in two-dimensional cell sheets, by which curved sheets including tubes and cups were simulated. We conclude that our inference method is applicable to tissues harboring cavities and cell sheets, and the resultant effective potentials are useful to simulate the morphologies.

Indexed as

effective potential of cell-cell interactionemergent property of multicellular systemmechanicsmorphological diversitymouse blastocyst

Identifiers

PMID39105171
PMCPMC11298474

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.