Evidence map›Paper›PMID 39108265›Full record

ArticleFrontiers in immunology2024

HIGD1B, as a novel prognostic biomarker, is involved in regulating the tumor microenvironment and immune cell infiltration; its overexpression leads to poor prognosis in gastric cancer patients.

Shibo Wang, Siyi Zhang, Xiaoxuan Li, Xiangxue Li, Shufen Zhao, Jing Guo, Shasha Wang, Rui Wang, Mengqi Zhang, Wensheng Qiu

Abstract read
In one paragraph

Article in Frontiers in immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Shibo Wang *Department of Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Siyi Zhang *Department of Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Xiaoxuan LiDepartment of Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Xiangxue LiDepartment of Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Shufen ZhaoDepartment of Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Jing GuoDepartment of Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Shasha WangDepartment of Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Rui WangDepartment of Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Mengqi ZhangDepartment of Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Wensheng QiuDepartment of Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: HIGD1B (HIG1 Hypoxia Inducible Domain Family Member 1B) is a protein-coding gene linked to the occurrence and progression of various illnesses. However, its precise function in gastric cancer (GC) remains unclear. Methods: The expression of HIGD1B is determined through the TCGA and GEO databases and verified using experiments. The association between HIGD1B and GC patients' prognosis was analyzed via the Kaplan-Meier (K-M) curve. Subsequently, the researchers utilized ROC curves to assess the diagnostic capacity of HIGD1B and employed COX analysis to investigate risk factors for GC. The differentially expressed genes (DEGs) were then subjected to functional enrichment analysis, and a nomogram was generated to forecast the survival outcome and probability of GC patients. Additionally, we evaluated the interaction between HIGD1B and the immune cell infiltration and predicted the susceptibility of GC patients to therapy. Results: HIGD1B is markedly elevated in GC tissue and cell lines, and patients with high HIGD1B expression have a poorer outcome. In addition, HIGD1B is related to distinct grades, stages, and T stages. The survival ROC curves of HIGD1B and nomogram for five years were 0.741 and 0.735, suggesting appropriate levels of diagnostic efficacy. According to Cox regression analysis, HIGD1B represents a separate risk factor for the prognosis of gastric cancer (p<0.01). GSEA analysis demonstrated that the HIGD1B is closely related to cancer formation and advanced pathways. Moreover, patients with high HIGD1B expression exhibited a higher level of Tumor-infiltration immune cells (TIICs) and were more likely to experience immune escape and drug resistance after chemotherapy and immunotherapy. Conclusion: This study explored the potential mechanisms and diagnostic and prognostic utility of HIGD1B in GC, as well as identified HIGD1B as a valuable biomarker and possible therapeutic target for GC.

Indexed as

Biomarkers, TumorGene Expression Regulation, NeoplasticStomach NeoplasmsTumor MicroenvironmentCell Line, TumorFemaleHumansIntracellular Signaling Peptides and ProteinsKaplan-Meier EstimateLymphocytes, Tumor-InfiltratingMaleMiddle AgedMitochondrial ProteinsNomogramsPrognosisBiomarkers, TumorHIGD1A protein, humanIntracellular Signaling Peptides and ProteinsMitochondrial Proteinsgastric cancerHIGD1Bimmune infiltrationimmunotherapyprognostic biomarkerTME

Identifiers

PMID39108265
PMCPMC11300267

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.