Evidence map›Paper›PMID 39115138›Full record

ArticleJournal of fish biology2024

Size-selective harvesting drives genomic shifts in a harvested population.

Daniel E Sadler, Tiina Sävilammi, Stephan N van Dijk, Phillip C Watts, Silva Uusi-Heikkilä

Abstract read
In one paragraph

Article in Journal of fish biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Daniel E SadlerDepartment of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland.ORCID https://orcid.org/0000-0001-9715-3270
Tiina SävilammiDepartment of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland.
Stephan N van DijkDepartment of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland.
Phillip C WattsDepartment of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland.
Silva Uusi-HeikkiläDepartment of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland.

Funding

Academy of Finland 325107
6 · The paper itself

Abstract

Overfishing not only drastically reduces the number of fish in an exploited population but is also often selective for body size by removing the largest individuals from a population. Here, we study experimentally the evolutionary effects of size-selective harvesting using whole-genome sequencing on a model organism, the zebrafish (Danio rerio). We demonstrate genomic shifts in the populations exposed to size-selective harvesting for five generations and show reduced genetic diversity in all harvested lines, including the control line (non-size-selected). We also determine differences in groups of genes related to certain gene ontology annotations between size-selectively harvested lines, with enrichment in nervous system related genes in the large-selected lines. Our results illuminate the biological processes underlying fisheries-induced genetic changes and hence contribute toward the understanding of the changes potentially associated with the vulnerability of an exploited population to future stressors.

Indexed as

Body SizeFisheriesZebrafishAnimalsGenetic VariationGenomeWhole Genome Sequencingfisheries‐induced evolutiongenetic variationpopulation genomicssize‐selectionwhole‐genome sequencing

Identifiers

PMID39115138
PMCPMC11650958

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.