Evidence map›Paper›PMID 39120084›Full record

ArticleDevelopment (Cambridge, England)2024

Metabolic states influence chicken retinal pigment epithelium cell fate decisions.

J Raúl Perez-Estrada, Jared A Tangeman, Maeve Proto-Newton, Harshavardhan Sanaka, Byran Smucker, Katia Del Rio-Tsonis

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

J Raúl Perez-EstradaDepartment of Biology, Miami University, Oxford, OH 45056, USA.ORCID 0000-0003-2783-8658
Jared A TangemanDepartment of Biology, Miami University, Oxford, OH 45056, USA.
Maeve Proto-NewtonDepartment of Biology, Miami University, Oxford, OH 45056, USA.
Harshavardhan SanakaDepartment of Biology, Miami University, Oxford, OH 45056, USA.
Byran SmuckerCenter for Visual Sciences, Miami University, Oxford, OH 45056, USA.
Katia Del Rio-TsonisDepartment of Biology, Miami University, Oxford, OH 45056, USA.ORCID 0000-0002-3051-6716

Funding

The role of Injury signals in RPE ReprogrammingR01EY026816 · NEI · MIAMI UNIVERSITY OXFORD · PI DEL RIO-TSONIS, KATIA · 2016 to 2020
$1.8M
A Roadmap to Uncover RPE PlasticityR01EY034980 · NEI · MIAMI UNIVERSITY OXFORD · PI Katia Del Rio-Tsonis · 2023 to 2026
$1.4M
Elucidating the gene regulatory networks that drive neural regenerationF99NS129167 · NINDS · MIAMI UNIVERSITY OXFORD · PI TANGEMAN, JARED A · 2022 to 2022
$41k
NEI NIH HHS R01 EY026816NEI NIH HHS R01 EY034980NINDS NIH HHS F99 NS129167
6 · The paper itself

Abstract

During tissue regeneration, proliferation, dedifferentiation and reprogramming are necessary to restore lost structures. However, it is not fully understood how metabolism intersects with these processes. Chicken embryos can regenerate their retina through retinal pigment epithelium (RPE) reprogramming when treated with fibroblast factor 2 (FGF2). Using transcriptome profiling, we uncovered extensive regulation of gene sets pertaining to proliferation, neurogenesis and glycolysis throughout RPE-to-neural retina reprogramming. By manipulating cell media composition, we determined that glucose, glutamine or pyruvate are individually sufficient to support RPE reprogramming, identifying glycolysis as a requisite. Conversely, the activation of pyruvate dehydrogenase by inhibition of pyruvate dehydrogenase kinases, induces epithelial-to-mesenchymal transition, while simultaneously blocking the activation of neural retina fate. We also identified that epithelial-to-mesenchymal transition fate is partially driven by an oxidative environment. Our findings provide evidence that metabolism controls RPE cell fate decisions and provide insights into the metabolic state of RPE cells, which are prone to fate changes in regeneration and pathologies, such as proliferative vitreoretinopathy.

Indexed as

GlycolysisRetinal Pigment EpitheliumAnimalsCell DifferentiationCell ProliferationCellular ReprogrammingChick EmbryoChickensEpithelial-Mesenchymal TransitionFibroblast Growth Factor 2GlucoseGlutamineNeurogenesisFibroblast Growth Factor 2GlucoseGlutamineMetabolismReprogrammingRPE

Identifiers

PMID39120084
PMCPMC11708821

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.