Evidence map›Paper›PMID 39125658›Full record

ArticleInternational journal of molecular sciences2024

DNA Sequence Variations Affecting Serotonin Transporter Transcriptional Regulation and Activity: Do They Impact Alcohol Addiction?

Giampiero Ferraguti, Silvia Francati, Claudia Codazzo, Giovanna Blaconà, Giancarlo Testino, Antonio Angeloni, Marco Fiore, Mauro Ceccanti, Marco Lucarelli

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Giampiero FerragutiDepartment of Experimental Medicine, Sapienza University of Rome, 00161 Rome, Italy.ORCID 0000-0001-6129-4071
Silvia FrancatiDepartment of Experimental Medicine, Sapienza University of Rome, 00161 Rome, Italy.ORCID 0009-0009-7672-6696
Claudia CodazzoUOSD Genetica Medica, Asl Roma1, 00193 Roma, Italy.
Giovanna BlaconàDepartment of Experimental Medicine, Sapienza University of Rome, 00161 Rome, Italy.
Giancarlo TestinoDepartment of Experimental Medicine, Sapienza University of Rome, 00161 Rome, Italy.
Antonio AngeloniDepartment of Experimental Medicine, Sapienza University of Rome, 00161 Rome, Italy.
Marco FioreInstitute of Biochemistry and Cell Biology, IBBC-CNR, 00161 Rome, Italy.ORCID 0000-0001-6806-9715
Mauro CeccantiSITAC, Società Italiana Per il Trattamento Dell'alcolismo e le Sue Complicanze, 00185 Rome, Italy.ORCID 0000-0001-9981-8715
Marco LucarelliDepartment of Experimental Medicine, Sapienza University of Rome, 00161 Rome, Italy.ORCID 0000-0002-5538-2494

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic features of alcohol dependence have been extensively investigated in recent years. A large body of studies has underlined the important role of genetic variants not only in metabolic pathways but also in the neurobiology of alcohol dependence, mediated by the neuronal circuits regulating reward and craving. Serotonin transporter (5-HTT), encoded by the SLC6A4 gene (Solute carrier family 6-neurotransmitter transporter-member 4), is targeted by antidepressant drugs such as selective serotonin reuptake inhibitors (SSRIs) and plays a pivotal role in serotoninergic transmission; it has been associated with psychiatric diseases and alcohol dependence. Transcriptional regulation and expression of 5-HTT depend not only on epigenetic modifications, among which DNA methylation (CpG and non-CpG) is primarily involved, but also on sequence variations occurring in intron/exon regions and in untranslated regions in 5' and 3', being the first sequences important for the splicing machinery and the last for the binding of transcription factors and micro RNAs. This work intends to shed light on the role of sequence variations known to affect the expression or function of 5-HTT in alcohol-dependent individuals. We found a statistically significant difference in the allelic (

Indexed as

AlcoholismSerotonin Plasma Membrane Transport ProteinsAdultAllelesDNA MethylationFemaleGene Expression RegulationGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansMaleMiddle AgedPolymorphism, GeneticTranscription, GeneticSerotonin Plasma Membrane Transport ProteinsSLC6A4 protein, humanalcohol dependencegene expressionmolecular biologypolymorphismsserotonin transporter

Identifiers

PMID39125658
PMCPMC11311659

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.