Evidence map›Paper›PMID 39125819›Full record

ArticleInternational journal of molecular sciences2024

Identification and Characterization of miRNAs and lncRNAs Associated with Salinity Stress in Rice Panicles.

Conghui Jiang, Yulong Wang, Yanan He, Yongbin Peng, Lixia Xie, Yaping Li, Wei Sun, Jinjun Zhou, Chongke Zheng, Xianzhi Xie

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Exploring the CeRNA landscape in plants: advances, methods, and challenges.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Conghui JiangInstitute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Yulong WangBeijing Key Laboratory of Crop Genetic Improvement, College of Agronomy and Biotechnology, China Agricultural University, Beijing 100193, China.
Yanan HeInstitute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Yongbin PengInstitute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Lixia XieInstitute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Yaping LiInstitute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Wei SunInstitute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Jinjun ZhouInstitute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Chongke ZhengInstitute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Xianzhi XieInstitute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China.

Funding

Agricultural Scientific and Technological Innovation Project of Shandong Academy of Agricultural Sciences CXGC2024F14Agricultural Variety Improvement Project of Shandong Province 2021LZGC020Agricultural Variety Improvement Project of Shandong Province 2023LZGC021the Key R&D plan of Shandong Province 2021LZGC026
6 · The paper itself

Abstract

Salinity is a common abiotic stress that limits crop productivity. Although there is a wealth of evidence suggesting that miRNA and lncRNA play important roles in the response to salinity in rice seedlings and reproductive stages, the mechanism by which competing endogenous RNAs (ceRNAs) influence salt tolerance and yield in rice has been rarely reported. In this study, we conducted full whole-transcriptome sequencing of rice panicles during the reproductive period to clarify the role of ceRNAs in the salt stress response and yield. A total of 214 lncRNAs, 79 miRNAs, and 584 mRNAs were identified as differentially expressed RNAs under salt stress. Functional analysis indicates that they play important roles in GO terms such as response to stress, biosynthesis processes, abiotic stimuli, endogenous stimulus, and response to stimulus, as well as in KEGG pathways such as secondary metabolite biosynthesis, carotenoid biosynthesis, metabolic pathways, and phenylpropanoid biosynthesis. A ceRNA network comprising 95 lncRNA-miRNA-mRNA triplets was constructed. Two lncRNAs, MSTRG.51634.2 and MSTRG.48576.1, were predicted to bind to osa-miR172d-5p to regulate the expression of

Indexed as

Gene Expression Regulation, PlantMicroRNAsOryzaRNA, Long NoncodingSalt StressGene Expression ProfilingGene Regulatory NetworksRNA, MessengerRNA, PlantSalt ToleranceTranscriptomeMicroRNAsRNA, Long NoncodingRNA, MessengerRNA, PlantceRNAlncRNAmiRNAricesalinity stress

Identifiers

PMID39125819
PMCPMC11311799

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.