Evidence map›Paper›PMID 39126421›Full record

ArticleMicrobial biotechnology2024

Into the metabolic wild: Unveiling hidden pathways of microbial metabolism.

Özge Ata, Diethard Mattanovich

Abstract read
In one paragraph

Article in Microbial biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Özge AtaDepartment of Biotechnology, Institute of Microbiology and Microbial Biotechnology, BOKU University, Vienna, Austria.ORCID 0000-0001-7157-2039
Diethard MattanovichDepartment of Biotechnology, Institute of Microbiology and Microbial Biotechnology, BOKU University, Vienna, Austria.ORCID 0000-0002-0907-4167

Funding

Austrian Science Fund 10.55776/I6795Austrian Science Fund 10.55776/I6812Austrian Science Fund 10.55776/M2891Horizon 2020 Framework Programme 101000441
6 · The paper itself

Abstract

Microbial metabolism has been deeply studied over decades and it is considered to be understood to a great extent. Annotated genome sequences of many microbial species have contributed a lot to generating biochemical knowledge on metabolism. However, researchers still discover novel pathways, unforeseen reactions or unexpected metabolites which contradict to the expected canon of biochemical reactions in living organisms. Here, we highlight a few examples of such non-canonical pathways, how they were found, and what their importance in microbial biotechnology may be. The predictive power of metabolic modelling, well-founded on biochemical knowledge and genomic information is discussed in the light of both discovery of yet unknown existing metabolic routes and the prediction of others, new to Nature.

Indexed as

BacteriaMetabolic Networks and PathwaysBiotechnology

Identifiers

PMID39126421
PMCPMC11316390

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.