Evidence map›Paper›PMID 39138200›Full record

ArticleNature communications2024

Clonal background and routes of plasmid transmission underlie antimicrobial resistance features of bloodstream Klebsiella pneumoniae.

Odion O Ikhimiukor, Nicole I Zac Soligno, Ifeoluwa J Akintayo, Michael M Marcovici, Stephanie S R Souza, Adrienne Workman, Isabella W Martin, Cheryl P Andam

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. ESBL-ProducingMicroorganisms · 2025
    Article
  16. Article
  17. Mobile genetic elements inJournal of bacteriology · 2025
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Odion O IkhimiukorDepartment of Biological Sciences, State University of New York at Albany, Albany, NY, USA. oikhimiukor@albany.edu.ORCID 0000-0002-3738-4584
Nicole I Zac SolignoDepartment of Biological Sciences, State University of New York at Albany, Albany, NY, USA.ORCID 0009-0006-1476-2593
Ifeoluwa J AkintayoInstitute for Infection Prevention and Hospital Epidemiology, Medical Centre, University of Freiburg, Freiburg, Germany.ORCID 0000-0002-4234-7649
Michael M MarcoviciDepartment of Biological Sciences, State University of New York at Albany, Albany, NY, USA.
Stephanie S R SouzaDepartment of Biological Sciences, State University of New York at Albany, Albany, NY, USA.ORCID 0000-0002-4207-8231
Adrienne WorkmanDepartment of Pathology and Laboratory Medicine, Dartmouth-Hitchcock Medical Center, Lebanon, NH, USA.ORCID 0009-0007-5088-0690
Isabella W MartinDepartment of Pathology and Laboratory Medicine, Dartmouth-Hitchcock Medical Center, Lebanon, NH, USA.ORCID 0000-0001-7974-9767
Cheryl P AndamDepartment of Biological Sciences, State University of New York at Albany, Albany, NY, USA. candam@albany.edu.ORCID 0000-0003-4428-0924

Funding

Population and evolutionary dynamics of recombining genes and alleles in bacteriaR35GM142924 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI Cheryl Marie P Andam · 2021 to 2026
$1.9M
NIGMS NIH HHS R35 GM142924U.S. Department of Health & Human Services | National Institutes of Health (NIH) R35GM142924
6 · The paper itself

Abstract

Bloodstream infections caused by the opportunistic pathogen Klebsiella pneumoniae are associated with adverse health complications and high mortality rates. Antimicrobial resistance (AMR) limits available treatment options, thus exacerbating its public health and clinical burden. Here, we aim to elucidate the population structure of K. pneumoniae in bloodstream infections from a single medical center and the drivers that facilitate the dissemination of AMR. Analysis of 136 short-read genome sequences complemented with 12 long-read sequences shows the population consisting of 94 sequence types (STs) and 99 clonal groups, including globally distributed multidrug resistant and hypervirulent clones. In vitro antimicrobial susceptibility testing and in silico identification of AMR determinants reveal high concordance (90.44-100%) for aminoglycosides, beta-lactams, carbapenems, cephalosporins, quinolones, and sulfonamides. IncF plasmids mediate the clonal (within the same lineage) and horizontal (between lineages) transmission of the extended-spectrum beta-lactamase gene bla

Indexed as

Anti-Bacterial Agentsbeta-LactamasesKlebsiella InfectionsKlebsiella pneumoniaeMicrobial Sensitivity TestsPlasmidsBacteremiaCarbapenemsDrug Resistance, Multiple, BacterialHumansVirulenceAnti-Bacterial Agentsbeta-lactamase CTX-M-15beta-LactamasesCarbapenems

Identifiers

PMID39138200
PMCPMC11322185

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.