Evidence map›Paper›PMID 39138723›Full record

ArticlePlanta2024

The interaction between miR165/166 and miR160 regulates Arabidopsis thaliana seed size, weight, and number in a ROS-dependent manner.

Natalia Pawłasek, Anna Sokołowska, Marek Koter, Krystyna Oracz

Abstract read
In one paragraph

Article in Planta, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Natalia PawłasekDepartment of Plant Physiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, Nowoursynowska Str. 159, 02-776, Warsaw, Poland.
Anna SokołowskaDepartment of Plant Physiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, Nowoursynowska Str. 159, 02-776, Warsaw, Poland.
Marek KoterDepartment of Plant Genetics, Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences-SGGW, Nowoursynowska Str. 159, 02-776, Warsaw, Poland.
Krystyna OraczDepartment of Plant Physiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, Nowoursynowska Str. 159, 02-776, Warsaw, Poland. krystyna_oracz@sggw.edu.pl.

Funding

Narodowe Centrum Nauki 2016/23/B/NZ3/03147
6 · The paper itself

Abstract

MAIN

conclusionOur data link the miR165/166- and miR160-mediated regulatory modules to ROS and seed formation. Trade-offs of seed size, weight, and number probably require control of the expression of miR165/166 by miR160, modulation of ROS metabolism by miR165/166, and miR160 abundance by ROS-induced oxidative modifications The cycle of plant life and its yield productivity depends fundamentally on the establishment of the trade-offs of seed size, weight, and number. For annual plants, seed number should simply be a positive function of vegetative biomass and a negative function of seed size and/or weight. However, extensive natural variation within species is observed for these traits, for which an optimal solution is environmentally dependent. Understanding the miRNA-mediated post-transcriptional regulation of gene expression determining seed phenotype and number is crucial from both an evolutionary and applied perspective. Although extensive research has concentrated on the individual roles of miRNAs in plant life, fewer studies have centred on their functional interactions, hence this study aimed to examine whether the module of miR165/miR166 and/or miR160 interactions is involved in forming Arabidopsis thaliana seeds, and/or has an impact on their features. Considering that reactive oxygen species (ROS) are among key players in seed-related processes, it was also intriguing to verify if the mechanism of action of these miRNAs is associated with the ROS pathway. The plant material used in this study consisted of flower buds, green siliques, and freshly harvested seeds, of wild type (WT), and STTM165/166 and STTM160 × 165/166 mutants of A. thaliana plants which are powerful tools for functional analysis of miRNAs in plants. The novel results obtained during physiological phenotyping together with two-tailed qRT-PCR analysis of mature miR165, miR166, miR160, and spectrofluorimetric measurement of apoplastic hydrogen peroxide (H

Indexed as

ArabidopsisGene Expression Regulation, PlantMicroRNAsReactive Oxygen SpeciesSeedsArabidopsis ProteinsPhenotypeRNA, PlantArabidopsis ProteinsMicroRNAsReactive Oxygen SpeciesRNA, PlantHydrogen peroxideMiRNAsReactive oxygen species (ROS)Seed formationSignaling pathwaysYield

Identifiers

PMID39138723
PMCPMC11322425

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.