Evidence map›Paper›PMID 39144582›Full record

ArticleJournal of medical imaging (Bellingham, Wash.)2024

Task-based assessment for neural networks: evaluating undersampled MRI reconstructions based on human observer signal detection.

Joshua D Herman, Rachel E Roca, Alexandra G O'Neill, Marcus L Wong, Sajan Goud Lingala, Angel R Pineda

Abstract read
In one paragraph

Article in Journal of medical imaging (Bellingham, Wash.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Joshua D HermanManhattan College, Department of Mathematics, The Bronx, New York, United States.
Rachel E RocaManhattan College, Department of Mathematics, The Bronx, New York, United States.
Alexandra G O'NeillManhattan College, Department of Mathematics, The Bronx, New York, United States.ORCID https://orcid.org/0000-0002-6785-7805
Marcus L WongManhattan College, Department of Mathematics, The Bronx, New York, United States.
Sajan Goud LingalaUniversity of Iowa, Roy J. Carver Department of Biomedical Engineering, Iowa City, Iowa, United States.ORCID https://orcid.org/0000-0002-1812-6256
Angel R PinedaManhattan College, Department of Mathematics, The Bronx, New York, United States.ORCID https://orcid.org/0000-0002-8820-0511

Funding

Optimizing Acquisition and Reconstruction of Under-sampled MRI for Signal DetectionR15EB029172 · NIBIB · MANHATTAN COLLEGE · PI PINEDA, ANGEL RAMON · 2020 to 2023
$827k
NIBIB NIH HHS R15 EB029172
6 · The paper itself

Abstract

Purpose: Recent research explores using neural networks to reconstruct undersampled magnetic resonance imaging. Because of the complexity of the artifacts in the reconstructed images, there is a need to develop task-based approaches to image quality. We compared conventional global quantitative metrics to evaluate image quality in undersampled images generated by a neural network with human observer performance in a detection task. The purpose is to study which acceleration (2×, 3×, 4×, 5×) would be chosen with the conventional metrics and compare it to the acceleration chosen by human observer performance. Approach: We used common global metrics for evaluating image quality: the normalized root mean squared error (NRMSE) and structural similarity (SSIM). These metrics are compared with a measure of image quality that incorporates a subtle signal for a specific task to allow for image quality assessment that locally evaluates the effect of undersampling on a signal. We used a U-Net to reconstruct under-sampled images with 2×, 3×, 4×, and 5× one-dimensional undersampling rates. Cross-validation was performed for a 500- and a 4000-image training set with both SSIM and MSE losses. A two-alternative forced choice (2-AFC) observer study was carried out for detecting a subtle signal (small blurred disk) from images with the 4000-image training set. Results: We found that for both loss functions, the human observer performance on the 2-AFC studies led to a choice of a 2× undersampling, but the SSIM and NRMSE led to a choice of a 3× undersampling. Conclusions: For this detection task using a subtle small signal at the edge of detectability, SSIM and NRMSE led to an overestimate of the achievable undersampling using a U-Net before a steep loss of image quality between 2×, 3×, 4×, 5× undersampling rates when compared to the performance of human observers in the detection task.

Indexed as

magnetic resonance imagingneural networkstask-based assessmentundersampling

Identifiers

PMID39144582
PMCPMC11321363

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.