Evidence map›Paper›PMID 39156495›Full record

ArticleEuropean urology open science2024

Evaluation of Genetic Associations with Clinical Phenotypes of Kidney Stone Disease.

Ryan S Hsi, Siwei Zhang, Jefferson L Triozzi, Adriana M Hung, Yaomin Xu, Cosmin A Bejan

Abstract read
In one paragraph

Article in European urology open science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Observational
  2. Review
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Ryan S HsiDepartment of Urology, Vanderbilt University Medical Center, Nashville, TN, USA.
Siwei ZhangDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, USA.
Jefferson L TriozziDivision of Nephrology and Hypertension, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Adriana M HungDivision of Nephrology and Hypertension, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Yaomin XuDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, USA.
Cosmin A BejanDepartment of Urology, Vanderbilt University Medical Center, Nashville, TN, USA.

Funding

Leveraging Electronic Health Records and Genomic Biobanks for Kidney Stone DiseaseR21DK127075 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BEJAN, COSMIN ADRIAN, HSI, RYAN · 2021 to 2022
$476k
CSRD VA I01 CX001897NIDDK NIH HHS R21 DK127075
6 · The paper itself

Abstract

Background and objective: Previous studies have reported a strong genetic contribution to kidney stone risk. This study aims to identify genetic associations of kidney stone disease within a large-scale electronic health record system. Methods: We performed genome-wide association studies (GWASs) for nephrolithiasis from genotyped samples of 5571 cases and 83 692 controls. This analysis included a primary GWAS focused on nephrolithiasis and subsequent subgroup GWASs stratified by stone composition types. For significant risk variants, we performed association analyses with stone composition and first-time 24-h urine parameters. To assess disease severity, we investigated the associations with age at first stone diagnosis, age at first stone-related procedure, and time between first and second stone-related procedures. Key findings and limitations: The primary GWAS analysis identified ten significant loci, all located on chromosome 16 within coding regions of the Conclusions and clinical implications: We replicated germline variants associated with kidney stone disease risk at Patient summary: We identify genetic variants linked to kidney stone disease within an electronic health record (EHR) system. These findings suggest a role for the EHR to enable a precision-medicine approach for stone disease.

Indexed as

Electronic health recordsGenome-wide association studyKidney calculiNephrolithiasisPrecision phenotyping

Identifiers

PMID39156495
PMCPMC11327546

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.