Evidence map›Paper›PMID 39162531›Full record

ArticlemSphere2024

Mapping disparities in viral infection rates using highly multiplexed serology.

Alejandra Piña, Evan A Elko, Rachel Caballero, Morgan Metrailer, Mary Mulrow, Dan Quan, Lora Nordstrom, John A Altin, Jason T Ladner

Abstract read
In one paragraph

Article in mSphere, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Alejandra Piña *The Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, USA.
Evan A Elko *The Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, USA.ORCID 0000-0001-6472-3169
Rachel CaballeroValleywise Health, Phoenix, Arizona, USA.
Morgan MetrailerThe Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, USA.
Mary MulrowValleywise Health, Phoenix, Arizona, USA.
Dan QuanValleywise Health, Phoenix, Arizona, USA.
Lora NordstromValleywise Health, Phoenix, Arizona, USA.
John A AltinThe Translational Genomics Research Institute (TGen), Flagstaff, Arizona, USA.
Jason T LadnerThe Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, USA.ORCID 0000-0001-7751-4366

Funding

SSCIMA: Integrating Analysis of Socio-economic Sub-population Dynamics to Improve Spatial Models of Infectious DiseaseU54MD012388 · NIMHD · NORTHERN ARIZONA UNIVERSITY · PI Emily K Cope · 2017 to 2026
$49.7M
A scalable platform for highly-multiplexed analysis of antibody reactivity from <1uL of bloodU24AI152172 · NIAID · TRANSLATIONAL GENOMICS RESEARCH INST · PI ALTIN, JOHN · 2020 to 2024
$3.3M
NIAID NIH HHS U24 AI152172NIMHD NIH HHS U54 MD012388
6 · The paper itself

Abstract

Despite advancements in medical interventions, the disease burden caused by viral pathogens remains large and highly diverse. This burden includes the wide range of signs and symptoms associated with active viral replication as well as a variety of clinical sequelae of infection. Moreover, there is growing evidence supporting the existence of sex- and ethnicity-based health disparities linked to viral infections and their associated diseases. Despite several well-documented disparities in viral infection rates, our current understanding of virus-associated health disparities remains incomplete. This knowledge gap can be attributed, in part, to limitations of the most commonly used viral detection methodologies, which lack the breadth needed to characterize exposures across the entire virome. Additionally, virus-related health disparities are dynamic and often differ considerably through space and time. In this study, we utilize PepSeq, an approach for highly multiplexed serology, to broadly assess an individual's history of viral exposures, and we demonstrate the effectiveness of this approach for detecting infection disparities through a pilot study of 400 adults aged 30-60 in Phoenix, AZ. Using a human virome PepSeq library, we observed expected seroprevalence rates for several common viruses and detected both expected and previously undocumented differences in inferred rates of infection between our male/female and Hispanic/non-Hispanic White individuals. IMPORTANCE: Our understanding of population-level virus infection rates and associated health disparities is incomplete. In part, this is because of the high diversity of human-infecting viruses and the limited breadth and sensitivity of traditional approaches for detecting infection events. Here, we demonstrate the potential for modern, highly multiplexed antibody detection methods to greatly increase our understanding of disparities in rates of infection across subpopulations (e.g., different sexes or ethnic groups). The use of antibodies as biomarkers allows us to detect evidence of past infections over an extended period, and our approach for highly multiplexed serology (PepSeq) allows us to measure antibody responses against hundreds of viruses in an efficient and cost-effective manner.

Indexed as

Virus DiseasesAdultFemaleHealth Status DisparitiesHumansMaleMiddle AgedPilot ProjectsSeroepidemiologic StudiesSerologic TestsViromeVirusesantibody repertoireEnterovirus Chealth disparitieshepatitis A virushighly multiplexed serologyhuman adenovirus Dhuman herpesviruseshuman immunodeficiency virusPepSeqsalivirus Aviromevirus

Identifiers

PMID39162531
PMCPMC11423740

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.