Evidence map›Paper›PMID 39172816›Full record

ArticlePloS one2024

Effect of light on ascorbic acid biosynthesis and bioinformatics analysis of related genes in Chinese chives.

Yuxuan Qian, Jing Tong, Ning Liu, Baoju Wang, Yanhai Ji, Zhanhui Wu

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yuxuan QianBeijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Science, Beijing, China.ORCID 0009-0004-1601-2505
Jing TongBeijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Science, Beijing, China.
Ning LiuBeijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Science, Beijing, China.
Baoju WangBeijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Science, Beijing, China.
Yanhai JiBeijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Science, Beijing, China.
Zhanhui WuBeijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Science, Beijing, China.ORCID 0000-0003-2753-0645

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ascorbic acid (AsA) is an essential nutritional component and powerful antioxidant in vegetables, and in plants, AsA levels are regulated by light. AsA levels in the leaves of Chinese chive (Allium tuberosum Rottler ex Spr), a popular vegetable, are poorly understood. Thus, this study was performed to assess the influence of light on AsA biosynthesis in chive and select related genes (AtuGGP1 and AtuGME1); in addition, bioinformatic analyses and gene expression level assays were performed. The biological information obtained for AtuGGP1 and AtuGME1 was analysed with several tools, including NCBI, DNAMAN, and MEGA11. After different light treatments were performed, the Chive AsA content and AtuGGP1 and AtuGME1 expression levels were determined. These results suggest that 1) compared with natural light, continuous darkness inhibited AsA synthesis in chives. 2) The amino acid sequences of AtuGGP1 and AtuGME1 are very similar to those of other plants. 3) The trends observed for the expression levels of AtuGGP1 and AtuGME1 were consistent with the AsA content observed in chives. Hence, we speculated that light controls AsA biosynthesis in chives by regulating AtuGGP1 and AtuGME1 expression. This study provided impactful and informative evidence regarding the functions of GGP and GME in chives.

Indexed as

Ascorbic AcidComputational BiologyGene Expression Regulation, PlantLightGenes, PlantPlant LeavesPlant ProteinsAscorbic AcidPlant Proteins

Identifiers

PMID39172816
PMCPMC11340962

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.