Evidence map›Paper›PMID 39187382›Full record

ArticleRNA (New York, N.Y.)2024

Improved functions for nonlinear sequence comparison using SEEKR.

Shuang Li, Quinn E Eberhard, Luke Ni, J Mauro Calabrese

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Shuang LiDepartment of Pharmacology, University of North Carolina, Chapel Hill, North Carolina 27599, USA.ORCID 0000-0003-4658-9765
Quinn E EberhardDepartment of Pharmacology, University of North Carolina, Chapel Hill, North Carolina 27599, USA.ORCID 0000-0003-4197-1703
Luke NiChapel Hill High School, Chapel Hill, North Carolina 27516, USA.ORCID 0009-0004-3461-4198
J Mauro CalabreseDepartment of Pharmacology, University of North Carolina, Chapel Hill, North Carolina 27599, USA jmcalabr@med.unc.edu.ORCID 0000-0002-1213-2540

Funding

Mechanisms of gene regulation by long noncoding RNAsR35GM153293 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Joseph Mauro Calabrese · 2024 to 2026
$1.9M
NIGMS NIH HHS R35 GM153293
6 · The paper itself

Abstract

SEquence Evaluation through

Indexed as

RNA, Long NoncodingAlgorithmsAnimalsChromatinComputational BiologyHumansMiceSequence Analysis, RNASoftwareChromatinRNA, Long NoncodingXIST non-coding RNAeCLIPk-merlncRNAsequence comparisonXIST

Identifiers

PMID39187382
PMCPMC11482607

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.