Evidence map›Paper›PMID 39198552›Full record

ArticleScientific reports2024

Polygenic prediction of human longevity on the supposition of pervasive pleiotropy.

M Reza Jabalameli, Jhih-Rong Lin, Quanwei Zhang, Zhen Wang, Joydeep Mitra, Nha Nguyen, Tina Gao, Mark Khusidman, Sanish Sathyan, Gil Atzmon and 4 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

M Reza JabalameliDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Jhih-Rong LinDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Quanwei ZhangDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Zhen WangDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Joydeep MitraDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Nha NguyenDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Tina GaoDepartment of Medicine, Albert Einstein College of Medicine, New York, NY, USA.
Mark KhusidmanDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Sanish SathyanDepartment of Neurology, Albert Einstein College of Medicine, New York, NY, USA.
Gil AtzmonDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Sofiya MilmanDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Jan VijgDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Nir BarzilaiDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA.
Zhengdong D ZhangDepartment of Genetics, Albert Einstein College of Medicine, New York, NY, USA. zhengdong.zhang@einsteinmed.edu.

Funding

THE IMPACT OF CELLULAR DEFENSE ON THE ROLE OF Ku80 IN GENOME MAINTENANCE AND LONGP01AG017242 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 1999 to 2023
$46.1M
The role of hyaluronan in longevity and cancer resistance of longest-lived rodentP01AG047200 · NIA · UNIVERSITY OF ROCHESTER · PI Vadim N. Gladyshev · 2014 to 2026
$36.9M
Validation and characterization of the identified variants associated with human longevity in mouse modelsU19AG056278 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI JAN VIJG · 2017 to 2026
$24.5M
Einstein's Nathan Shock Center of Excellence in Basic Biology of AgingP30AG038072 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI VIJG, JAN · 2010 to 2024
$10.8M
Resilience to Alzheimer's disease in humans with exceptional longevityR01AG057909 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI BARZILAI, NIR J, ZHANG, ZHENGDONG · 2017 to 2021
$6.2M
Somatotropic Signaling and Resilience to Aging and Alzheimer's DiseaseR01AG061155 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI MILMAN, SOFIYA · 2019 to 2023
$4.3M
NIA NIH HHS P01 AG017242NIA NIH HHS P01 AG047200NIA NIH HHS P30 AG038072NIA NIH HHS R01 AG057909NIA NIH HHS R01 AG061155NIA NIH HHS U19 AG056278NIH HHS R01 AG057909NIH HHS R01 AG061155
6 · The paper itself

Abstract

The highly polygenic nature of human longevity renders pleiotropy an indispensable feature of its genetic architecture. Leveraging the genetic correlation between aging-related traits (ARTs), we aimed to model the additive variance in lifespan as a function of the cumulative liability from pleiotropic segregating variants. We tracked allele frequency changes as a function of viability across different age bins and prioritized 34 variants with an immediate implication on lipid metabolism, body mass index (BMI), and cognitive performance, among other traits, revealed by PheWAS analysis in the UK Biobank. Given the highly complex and non-linear interactions between the genetic determinants of longevity, we reasoned that a composite polygenic score would approximate a substantial portion of the variance in lifespan and developed the integrated longevity genetic scores (iLGSs) for distinguishing exceptional survival. We showed that coefficients derived from our ensemble model could potentially reveal an interesting pattern of genomic pleiotropy specific to lifespan. We assessed the predictive performance of our model for distinguishing the enrichment of exceptional longevity among long-lived individuals in two replication cohorts (the Scripps Wellderly cohort and the Medical Genome Reference Bank (MRGB)) and showed that the median lifespan in the highest decile of our composite prognostic index is up to 4.8 years longer. Finally, using the proteomic correlates of iLGS, we identified protein markers associated with exceptional longevity irrespective of chronological age and prioritized drugs with repurposing potentials for gerotherapeutics. Together, our approach demonstrates a promising framework for polygenic modeling of additive liability conferred by ARTs in defining exceptional longevity and assisting the identification of individuals at a higher risk of mortality for targeted lifestyle modifications earlier in life. Furthermore, the proteomic signature associated with iLGS highlights the functional pathway upstream of the PI3K-Akt that can be effectively targeted to slow down aging and extend lifespan.

Indexed as

Genetic PleiotropyLongevityMultifactorial InheritanceAgedAged, 80 and overAgingFemaleGene FrequencyGenome-Wide Association StudyHumansMaleMiddle AgedPolymorphism, Single NucleotideAgingCentenariansCommon variantsLifespanLongevityPleiotropyPolygenic scoreProteomics

Identifiers

PMID39198552
PMCPMC11358495

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.