Evidence map›Paper›PMID 39239192›Full record

ArticleFrontiers in plant science2024

Genome-wide identification of actin-depolymerizing factor family genes in melon (

Yanling Lv, Shihang Liu, Jiawang Zhang, Jianing Cheng, Jinshu Wang, Lina Wang, Mingyang Li, Lu Wang, Shuangtian Bi, Wei Liu and 8 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in plant science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Yanling Lv *College of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Shihang Liu *College of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Jiawang ZhangInstitute of Vegetable, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Jianing ChengCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Jinshu WangCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Lina WangCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Mingyang LiCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Lu WangCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Shuangtian BiCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Wei LiuInstitute of Vegetable, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Lili ZhangInstitute of Vegetable, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Shilei LiuInstitute of Vegetable, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Dabo YanCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Chengxuan DiaoCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Shaobin ZhangCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Ming HeInstitute of Vegetable, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Yue GaoCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.
Che WangCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Actin depolymerizing factors (ADFs), as the important actin-binding proteins (ABPs) with depolymerizing/severing actin filaments, play a critical role in plant growth and development, and in response to biotic and abiotic stresses. However, the information and function of the ADF family in melon remains unclear. In this study, 9 melon ADF genes (CmADFs) were identified, distributed in 4 subfamilies, and located on 6 chromosomes respectively. Promoter analysis revealed that the CmADFs contained a large number of cis-acting elements related to hormones and stresses. The similarity of CmADFs with their Arabidopsis homologue AtADFs in sequence, structure, important sites and tissue expression confirmed that ADFs were conserved. Gene expression analysis showed that CmADFs responded to low and high temperature stresses, as well as ABA and SA signals. In particular, CmADF1 was significantly up-regulated under above all stress and hormone treatments, indicating that CmADF1 plays a key role in stress and hormone signaling responses, so CmADF1 was selected to further study the mechanism in plant tolerance low temperature. Under low temperature, virus-induced gene silencing (VIGS) of CmADF1 in oriental melon plants showed increased sensitivity to low temperature stress. Consistently, the stable genetic overexpression of CmADF1 in Arabidopsis improved their low temperature tolerance, possibly due to the role of CmADF1 in the depolymerization of actin filaments. Overall, our findings indicated that CmADF genes, especially CmADF1, function in response to abiotic stresses in melon.

Indexed as

ArabidopsisCmADF1genome-wide identificationlow temperatureoriental melon

Identifiers

PMID39239192
PMCPMC11374638

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.