Evidence map›Paper›PMID 39242633›Full record

ArticleScientific reports2024

The rs3918188 and rs1799983 loci of eNOS gene are associated with susceptibility in patients with systemic lupus erythematosus in Northeast China.

Xuan Zhang, Guiling Lin, Qi Zhang, Huitao Wu, Wenlu Xu, Zhe Wang, Ziman He, Linglan Su, Yanping Zhuang, Aimin Gong

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Xuan Zhang *College of Traditional Chinese Medicine, Hainan Medical University, Haikou, 571199, China.
Guiling Lin *College of Traditional Chinese Medicine, Hainan Medical University, Haikou, 571199, China.
Qi Zhang *Heilongjiang Academy of Chinese Medicine, Harbin, 150036, Heilongjiang, China.
Huitao WuHeilongjiang Academy of Chinese Medicine, Harbin, 150036, Heilongjiang, China.
Wenlu XuCollege of Traditional Chinese Medicine, Hainan Medical University, Haikou, 571199, China.
Zhe WangCollege of Traditional Chinese Medicine, Hainan Medical University, Haikou, 571199, China.
Ziman HeHeilongjiang Academy of Chinese Medicine, Harbin, 150036, Heilongjiang, China.
Linglan SuHeilongjiang Academy of Chinese Medicine, Harbin, 150036, Heilongjiang, China.
Yanping ZhuangInternational Research Center for Aging and Cancer, Hainan Medical University, Haikou, 571199, Hainan, China. yanpingzhuang_z@163.com.
Aimin GongCollege of Traditional Chinese Medicine, Hainan Medical University, Haikou, 571199, China. hy0204013@hainmc.edu.cn.

Funding

Hainan Provincial Science and Technology Department Key R&D Projects ZDYF2022SHFZ078Innovative Research Projects for Postgraduate Students at Hainan Medical University HYYS2021A12National Natural Science Foundation of China 82160874
6 · The paper itself

Abstract

To investigate the association between single nucleotide polymorphism (SNP) at the rs3918188, rs1799983 and rs1007311 loci of the endothelial nitric oxide synthase (eNOS) gene and genetic susceptibility to systemic lupus erythematosus (SLE) in northeastern China. The base distribution of eNOS gene rs3918188, rs1799983 and rs1007311 in 1712 human peripheral blood samples from Northeast China was detected by SNaPshot sequencing technology. The correlation between genotype, allele and gene model of these loci of the eNOS gene and the genetic susceptibility to SLE was investigated by logistic regression analysis. The results of the differences in the frequency distribution of their gene models were visualised using R 4.3.2 software. Finally, HaploView 4.2 software was used to analyse the relationship between the haplotypes of the three loci mentioned above and the genetic susceptibility to SLE. A multifactor dimensionality reduction (MDR) analysis was used to determine the best SNP-SNP interaction model. The CC genotype and C allele at the rs3918188 locus may be a risk factor for SLE (CC vs AA: OR = 1.827, P < 0.05; C vs A: OR = 1.558, P < 0.001), and this locus increased the risk of SLE in the dominant model and the recessive model (AC + CC vs AA: OR = 1.542, P < 0.05; CC vs AA + AC: OR = 1.707, P < 0.001), while the risk of SLE was reduced in the overdominant model (AC vs AA + CC: OR = 0.628, P < 0.001). The GT genotype and T allele at locus rs1799983 may be a protective factor for SLE (GT vs GG: OR = 0.328, P < 0.001; T vs G: OR = 0.438, P < 0.001) and this locus reduced the risk of SLE in the overdominant model (GT vs GG + TT: OR = 0.385, P < 0.001). There is a strong linkage disequilibrium between the rs1007311 and rs1799983 loci of the eNOS gene. Among them, the formed haplotype AG increased the risk of SLE compared to GG. AT and GT decreased the risk of SLE compared to GG. In this study, the eNOS gene rs3918188 and rs1799983 loci were found to be associated with susceptibility to SLE. This helps to deeply explore the mechanism of eNOS gene and genetic susceptibility to SLE. It provides a certain research basis for the subsequent exploration of the molecular mechanism of these loci and SLE, as well as the early diagnosis, treatment and prognosis of SLE.

Indexed as

Genetic Predisposition to DiseaseHaplotypesLupus Erythematosus, SystemicNitric Oxide Synthase Type IIIPolymorphism, Single NucleotideAdultAllelesCase-Control StudiesChinaFemaleGene FrequencyGenetic Association StudiesGenotypeHumansLinkage DisequilibriumMaleNitric Oxide Synthase Type IIINOS3 protein, humaneNOSNortheast ChinaSingle nucleotide polymorphismSystemic lupus erythematosus

Identifiers

PMID39242633
PMCPMC11379712

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.