Evidence map›Paper›PMID 39273222›Full record

ArticleInternational journal of molecular sciences2024

High-Throughput Transcriptomic Analysis of Circadian Rhythm of Chlorophyll Metabolism under Different Photoperiods in Tea Plants.

Zhi-Hang Hu, Meng-Zhen Sun, Kai-Xin Yang, Nan Zhang, Chen Chen, Jia-Wen Xiong, Ni Yang, Yi Chen, Hui Liu, Xing-Hui Li and 3 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Daylength extension: a strategy to enhance sucrose metabolism and carbohydrate accumulation for improving spike quality and corm production in Gladiolus (Physiology and molecular biology of plants : an international journal of functional plant biology · 2025
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Zhi-Hang HuTea Science Research Institute, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0009-0007-3428-8013
Meng-Zhen SunTea Science Research Institute, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Kai-Xin YangTea Science Research Institute, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Nan ZhangState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing 210095, China.
Chen ChenState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing 210095, China.
Jia-Wen XiongState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing 210095, China.
Ni YangTea Science Research Institute, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Yi ChenTea Science Research Institute, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Hui LiuState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing 210095, China.
Xing-Hui LiTea Science Research Institute, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Xuan ChenTea Science Research Institute, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0001-5553-3638
Ai-Sheng XiongState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0002-7900-5001
Jing ZhuangTea Science Research Institute, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0001-6960-5217

Funding

Collection and Creation of Horticultural Crop Germplasm Resources of Jiangsu JSFEM-202212Priority Academic Program Development of Jiangsu Higher Education Institutions Project PAPD
6 · The paper itself

Abstract

Tea plants are a perennial crop with significant economic value. Chlorophyll, a key factor in tea leaf color and photosynthetic efficiency, is affected by the photoperiod and usually exhibits diurnal and seasonal variations. In this study, high-throughput transcriptomic analysis was used to study the chlorophyll metabolism, under different photoperiods, of tea plants. We conducted a time-series sampling under a skeleton photoperiod (6L6D) and continuous light conditions (24 L), measuring the chlorophyll and carotenoid content at a photoperiod interval of 3 h (24 h). Transcriptome sequencing was performed at six time points across two light cycles, followed by bioinformatics analysis to identify and annotate the differentially expressed genes (DEGs) involved in chlorophyll metabolism. The results revealed distinct expression patterns of key genes in the chlorophyll biosynthetic pathway. The expression levels of

Indexed as

ChlorophyllCircadian RhythmGene Expression ProfilingGene Expression Regulation, PlantPhotoperiodTranscriptomeCamellia sinensisHigh-Throughput Nucleotide SequencingPlant ProteinsChlorophyllPlant ProteinsCamellia sinensischlorophyll metabolismexpression patternshigh-throughput transcriptomicsphotoperiodic regulation

Identifiers

PMID39273222
PMCPMC11395263

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.