Evidence map›Paper›PMID 39276247›Full record

ArticleHuman genetics2024

A methodology for gene level omics-WAS integration identifies genes influencing traits associated with cardiovascular risks: the Long Life Family Study.

Sandeep Acharya, Shu Liao, Wooseok J Jung, Yu S Kang, Vaha Akbary Moghaddam, Mary F Feitosa, Mary K Wojczynski, Shiow Lin, Jason A Anema, Karen Schwander and 3 more

Abstract read
In one paragraph

Article in Human genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. A Robust Serum Proteomic Signature of the E2 Allele of Apolipoprotein E.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  5. Article
  6. Article
  7. Novel Loci (medRxiv : the preprint server for health sciences · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Sandeep AcharyaDivision of Computational and Data Sciences, Washington University, St Louis, MO, USA.
Shu LiaoDepartment of Computer Science and Engineering, Washington University, St Louis, MO, USA.
Wooseok J JungDepartment of Computer Science and Engineering, Washington University, St Louis, MO, USA.
Yu S KangDepartment of Computer Science and Engineering, Washington University, St Louis, MO, USA.
Vaha Akbary MoghaddamDivision of Statistical Genomics, Washington University School of Medicine, St Louis, MO, USA.
Mary F FeitosaDivision of Statistical Genomics, Washington University School of Medicine, St Louis, MO, USA.
Mary K WojczynskiDivision of Statistical Genomics, Washington University School of Medicine, St Louis, MO, USA.
Shiow LinDivision of Statistical Genomics, Washington University School of Medicine, St Louis, MO, USA.
Jason A AnemaDivision of Statistical Genomics, Washington University School of Medicine, St Louis, MO, USA.
Karen SchwanderDivision of Statistical Genomics, Washington University School of Medicine, St Louis, MO, USA.
Jeff O ConnellDepartment of Medicine, University of Maryland, Baltimore, MD, USA.
Michael A ProvinceDivision of Statistical Genomics, Washington University School of Medicine, St Louis, MO, USA.
Michael R BrentDepartment of Computer Science and Engineering, Washington University, St Louis, MO, USA. brent@wustl.edu.

Funding

The Long Life Family StudyU19AG063893 · NIA · WASHINGTON UNIVERSITY · PI PAOLA SEBASTIANI · 2019 to 2026
$125.4M
Washington University Nutrition Obesity Research CenterP30DK056341 · NIDDK · WASHINGTON UNIVERSITY · PI Jonathan R Brestoff · 1999 to 2026
$30.2M
FRAMINGHAM HEART STUDY - YEAR 5 EXAM75N92019D00031 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI RAMACHANDRAN, VASAN · 2019 to 2024
$29.8M
INSTITUTIONAL TRAINING GRANT IN GENOMIC SCIENCET32HG000045 · NHGRI · WASHINGTON UNIVERSITY · PI MICHAEL R BRENT, Barak A Cohen · 1997 to 2026
$8.4M
THE FRAMINGHAM HEART STUDY-N01HC25195-268025195-268025195N01HC025195 · HC · TRUSTEES OF BOSTON UNIVERSITY · PI WOLF, PHILIP A · 2002 to 2006
–
NHGRI NIH HHS T32 HG000045NHLBI NIH HHS 75N92019D00031NHLBI NIH HHS HHSN268201500001CNHLBI NIH HHS HHSN268201500001INHLBI NIH HHS N01 HC025195NIA NIH HHS AG063893NIA NIH HHS U19 AG063893NIDDK NIH HHS P30 DK056341
6 · The paper itself

Abstract

The Long Life Family Study (LLFS) enrolled 4953 participants in 539 pedigrees displaying exceptional longevity. To identify genetic mechanisms that affect cardiovascular risks in the LLFS population, we developed a multi-omics integration pipeline and applied it to 11 traits associated with cardiovascular risks. Using our pipeline, we aggregated gene-level statistics from rare-variant analysis, GWAS, and gene expression-trait association by Correlated Meta-Analysis (CMA). Across all traits, CMA identified 64 significant genes after Bonferroni correction (p ≤ 2.8 × 10

Indexed as

Cardiovascular DiseasesGenome-Wide Association StudyAgedAged, 80 and overCohort StudiesFemaleGenetic Predisposition to DiseaseHumansLongevityMalePedigreePolymorphism, Single NucleotideProtein Interaction MapsQuantitative Trait Loci

Identifiers

PMID39276247
PMCPMC11485042

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.