Evidence map›Paper›PMID 39278908›Full record

ArticleVirology journal2024

Combining molecular transmission network analysis and spatial epidemiology to reveal HIV-1 transmission pattern among the older people in Nanjing, China.

Yuanyuan Xu, Tingyi Jiang, Li Jiang, Hongjie Shi, Xin Li, Mengkai Qiao, Sushu Wu, Rong Wu, Xin Yuan, Jingwen Wang and 1 more

Abstract read
In one paragraph

Article in Virology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yuanyuan Xu *Department of AIDS/STD Control and Prevention, Nanjing Municipal Central for Disease Control and Prevention, Nanjing, 210003, China.
Tingyi Jiang *School of Public Health, Nanjing Medical University, Nanjing, 211166, China.
Li Jiang *Department of Quality Management, Xiaoshan District Center for Disease Control and Prevention, Hangzhou, 311203, China.
Hongjie ShiDepartment of AIDS/STD Control and Prevention, Nanjing Municipal Central for Disease Control and Prevention, Nanjing, 210003, China.
Xin LiDepartment of AIDS/STD Control and Prevention, Nanjing Municipal Central for Disease Control and Prevention, Nanjing, 210003, China.
Mengkai QiaoDepartment of Microbiology Laboratory, Nanjing Municipal Central for Disease Control and Prevention, Nanjing, 210003, China.
Sushu WuDepartment of AIDS/STD Control and Prevention, Nanjing Municipal Central for Disease Control and Prevention, Nanjing, 210003, China.
Rong WuDepartment of AIDS/STD Control and Prevention, Nanjing Municipal Central for Disease Control and Prevention, Nanjing, 210003, China.
Xin YuanDepartment of AIDS/STD Control and Prevention, Nanjing Municipal Central for Disease Control and Prevention, Nanjing, 210003, China.
Jingwen WangDepartment of AIDS/STD Control and Prevention, Nanjing Municipal Central for Disease Control and Prevention, Nanjing, 210003, China.
Zhengping ZhuDepartment of AIDS/STD Control and Prevention, Nanjing Municipal Central for Disease Control and Prevention, Nanjing, 210003, China. zzp@njcdc.cn.

Funding

Jiangsu Province Capability Improvement Project through Science,Technology and Education ZDXYS202210Jiangsu Province Social Science Application Research Excellent Engineering project 23SYC-007Nanjing CDC Young Talents Research and Development Team Project NPY2307Nanjing Medical Science and Technology Development Project YKK23192Nanjing Medical Science and Technology Development Project ZKX23059Nanjing Medical University Nanjing Institute of Public Health Strong Foundation Project NQJ2301the Opening Foundation of Key Laboratory JSHD202329
6 · The paper itself

Abstract

backgroundIn China, the problem of HIV infection among the older people has become increasingly prominent. This study aimed to analyze the pattern and influencing factors of HIV transmission based on a genomic and spatial epidemiological analysis among this population.

methodsA total of 432 older people who were aged ≥ 50 years, newly diagnosed with HIV-1 between January 2018 and December 2021 and without a history of ART were enrolled. HIV-1 pol gene sequence was obtained by viral RNA extraction and nested PCR. The molecular transmission network was constructed using HIV-TRACE and the spatial distribution analyses were performed in ArcGIS. The multivariate logistic regression analysis was performed to analyze the factors associated with clustering.

resultsA total of 382 sequences were successfully sequenced, of which CRF07_BC (52.3%), CRF01_AE (32.5%), and CRF08_BC (6.8%) were the main HIV-1 strains. A total of 176 sequences entered the molecular network, with a clustering rate of 46.1%. Impressively, the clustering rate among older people infected through commercial heterosexual contact was as high as 61.7% and three female sex workers (FSWs) were observed in the network. The individuals who were aged ≥ 60 years and transmitted the virus by commercial heterosexual contact had a higher clustering rate, while those who were retirees or engaged other occupations and with higher education degree were less likely to cluster. There was a positive spatial correlation of clustering rate (Global Moran I = 0.206, P < 0.001) at the town level and the highly aggregated regions were mainly distributed in rural area. We determined three large clusters which mainly spread in the intra-region of certain towns in rural areas. Notably, 54.5% of cases in large clusters were transmitted through commercial heterosexual contact.

conclusionsOur joint analysis of molecular and spatial epidemiology effectively revealed the spatial aggregation of HIV transmission and highlighted that towns of high aggregation were mainly located in rural area. Also, we found vital role of commercial heterosexual contact in HIV transmission among older people. Therefore, health resources should be directed towards highly aggregated rural areas and prevention strategy should take critical persons as entry points.

Indexed as

HIV-1HIV InfectionsMolecular EpidemiologyAgedAged, 80 and overChinaCluster AnalysisFemaleGenotypeHumansMaleMiddle AgedPhylogenyRNA, ViralSpatial AnalysisRNA, ViralHIV/AIDSMolecular networkOlder peopleSpatial analysisTransmission cluster

Identifiers

PMID39278908
PMCPMC11404066

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.