Evidence map›Paper›PMID 39283496›Full record

ArticleArchives of virology2024

Completion of the genome sequence of Oidiodendron maius splipalmivirus 1.

Stefania Daghino, Marco Forgia, Massimo Turina

Abstract read
In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Stefania DaghinoInstitute for Sustainable Plant Protection, CNR, Strada delle Cacce 73, 10135, Torino, Italy.ORCID http://orcid.org/0000-0001-5722-1558
Marco ForgiaInstitute for Sustainable Plant Protection, CNR, Strada delle Cacce 73, 10135, Torino, Italy.ORCID http://orcid.org/0000-0003-0101-1046
Massimo TurinaInstitute for Sustainable Plant Protection, CNR, Strada delle Cacce 73, 10135, Torino, Italy. massimo.turina@ipsp.cnr.it.ORCID http://orcid.org/0000-0002-9659-9470

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycoviruses with an unprecedented genome organization, featuring the RNA-directed RNA polymerase (RdRp) palm domain coding sequence being split into two distinct genome segments, have been found recently in a few fungi and oomycetes of different lineages and have been proposed to be named "splipalmiviruses". One of these, Oidiodendron maius splipalmivirus 1 (OmSPV1), has been detected in the ericoid mycorrhizal fungus Oidiodendron maius, and it has been proposed to be bisegmented. Here, we complete the genome sequence of this virus by describing a third RNA segment, which is 2000 nt long and whose terminal sequences are identical to those of the other two segments of OmSPV1. This segment contains a single open reading frame that codes for a protein with unknown function and has a low level of sequence identity (47%) to the putative protein encoded by the third segment of another splipalmivirus from Magnaporthe oryzae: Magnaporthe oryzae narnavirus virus 1 (MoNV1). Based on these features, we propose the RNA segment to be the third segment of the OmSPV1 genome.

Indexed as

Fungal VirusesGenome, ViralOpen Reading FramesPhylogenyRNA, ViralBase SequenceBasidiomycotaRNA VirusesViral ProteinsRNA, ViralViral Proteins

Identifiers

PMID39283496
PMCPMC11405419

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.