Evidence map›Paper›PMID 39290362›Full record

ArticleFrontiers in digital health2024

A machine learning approach towards assessing consistency and reproducibility: an application to graft survival across three kidney transplantation eras.

Okechinyere Achilonu, George Obaido, Blessing Ogbuokiri, Kehinde Aruleba, Eustasius Musenge, June Fabian

Abstract read
In one paragraph

Article in Frontiers in digital health, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Okechinyere AchilonuDivision of Epidemiology and Biostatistics, School of Public Health, University of the Witwatersrand, Johannesburg, South Africa.
George ObaidoCenter for Human-Compatible Artificial Intelligence (CHAI), Berkeley Institute for Data Science (BIDS), University of California, Berkeley, Berkeley, CA, United States.
Blessing OgbuokiriDepartment of Computer Science, Brock University, St. Catharines, ON, Canada.
Kehinde ArulebaSchool of Computing and Mathematical Sciences, University of Leicester, Leicester, United Kingdom.
Eustasius MusengeDivision of Epidemiology and Biostatistics, School of Public Health, University of the Witwatersrand, Johannesburg, South Africa.
June FabianWits Donald Gordon Medical Centre, Faculty of Health Sciences, School of Clinical Medicine, University of the Witwatersrand, Johannesburg, South Africa.

Funding

Wellcome Trust
6 · The paper itself

Abstract

Background: In South Africa, between 1966 and 2014, there were three kidney transplant eras defined by evolving access to certain immunosuppressive therapies defined as Methods: This study explored the effectiveness of nine ML algorithms in predicting 10-year graft survival across the three eras. We developed and internally validated these algorithms using data spanning the specified eras. The predictive performance of these algorithms was assessed using the area under the curve (AUC) of the receiver operating characteristics curve (ROC), supported by other evaluation metrics. We employed local interpretable model-agnostic explanations to provide detailed interpretations of individual model predictions and used permutation importance to assess global feature importance across each era. Results: Overall, the proportion of graft failure decreased from 41.5% in the Conclusions: Our study emphasises the significance of analysing post-kidney transplant outcomes and identifying era-specific factors mitigating graft failure. The proposed framework can serve as a foundation for future research and assist physicians in identifying patients at risk of graft failure.

Indexed as

consistencygraft survivalimmunosuppressive regimenkidney transplantmachine learningreproducibilitytransplantation era

Identifiers

PMID39290362
PMCPMC11405382

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.