Evidence map›Paper›PMID 39295643›Full record

ArticleFrontiers in aging neuroscience2024

Genome-wide association analysis and admixture mapping in a Puerto Rican cohort supports an Alzheimer disease risk locus on chromosome 12.

Bilcag Akgun, Briseida E Feliciano-Astacio, Kara L Hamilton-Nelson, Kyle Scott, Joe Rivero, Larry D Adams, Jose J Sanchez, Glenies S Valladares, Sergio Tejada, Parker L Bussies and 18 more

Abstract read
In one paragraph

Article in Frontiers in aging neuroscience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Admixture mapping identifies complex trait associations with local ancestry in themedRxiv : the preprint server for health sciences · 2025
    Article
  4. Ancestral genomic functional differences in oligodendroglia: implications for Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Bilcag AkgunJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Briseida E Feliciano-AstacioUniversidad Central del Caribe, Bayamón, PR, United States.
Kara L Hamilton-NelsonJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Kyle ScottJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Joe RiveroJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Larry D AdamsJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Jose J SanchezJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Glenies S ValladaresJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Sergio TejadaJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Parker L BussiesJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Concepcion Silva-VergaraJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Vanessa C RodriguezJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Pedro R MenaJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Katrina CelisJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Patrice G WhiteheadJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Michael ProughJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Christina KosanovicJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Derek J Van BoovenJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Michael A SchmidtJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Heriberto AcostaClinica de la Memoria, San Juan, PR, United States.
Anthony J GriswoldJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Clifton L DalgardDepartment of Anatomy, Physiology, and Genetics, Uniformed Services University of the Health Sciences, Bethesda, MD, United States.
Katalina F McInerneyDepartment of Neurology, University of Miami Miller School of Medicine, Miami, FL, United States.
Gary W BeechamJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Michael L CuccaroJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Jeffery M VanceJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Margaret A Pericak-VanceJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.
Farid RajabliJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, United States.

Funding

Recruitment and Retention for Alzheimer's Disease Diversity Genetic Cohorts in the ADSP (READD-ADSP)U19AG074865 · NIA · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI GOLDIE S. BYRD, William S Bush · 2022 to 2026
$55.3M
Genetic basis of neuropsychiatric symptoms in Alzheimer's diseaseU01AG079850 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Gary Wayne Beecham, Edward D Huey · 2023 to 2026
$3.0M
Neuroanatomical associations with the factor structure underlying neuropsychiatric symptoms in Alzheimer's diseaseR01AG062268 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HUEY, EDWARD D · 2018 to 2022
$2.5M
Using RDoC Negative and Positive Valence Paradigms to Investigate the Mechanisms of Neuropsychiatric Symptoms (NPS) in Alzheimer's Disease and Related DementiasR01MH120794 · NIMH · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HUEY, EDWARD D · 2019 to 2023
$2.1M
NIA NIH HHS R01 AG062268NIA NIH HHS U01 AG079850NIA NIH HHS U19 AG074865NIMH NIH HHS R01 MH120794
6 · The paper itself

Abstract

Introduction: Hispanic/Latino populations are underrepresented in Alzheimer Disease (AD) genetic studies. Puerto Ricans (PR), a three-way admixed (European, African, and Amerindian) population is the second-largest Hispanic group in the continental US. We aimed to conduct a genome-wide association study (GWAS) and comprehensive analyses to identify novel AD susceptibility loci and characterize known AD genetic risk loci in the PR population. Materials and methods: Our study included Whole Genome Sequencing (WGS) and phenotype data from 648 PR individuals (345 AD, 303 cognitively unimpaired). We used a generalized linear-mixed model adjusting for sex, age, population substructure, and genetic relationship matrix. To infer local ancestry, we merged the dataset with the HGDP/1000G reference panel. Subsequently, we conducted univariate admixture mapping (AM) analysis. Results: We identified suggestive signals within the Conclusion: PR GWAS and AM analysis identified a suggestive AD risk locus on chromosome 12, which includes the

Indexed as

admixture mappingAlzheimer diseasechromosome 12genome-wide association studyPuerto Ricans

Identifiers

PMID39295643
PMCPMC11408238

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.