Evidence map›Paper›PMID 39297882›Full record

ArticleThe Journal of experimental medicine2024

SMARCA5-mediated chromatin remodeling is required for germinal center formation.

Liat Stoler-Barak, Dominik Schmiedel, Avital Sarusi-Portuguez, Adi Rogel, Ronnie Blecher-Gonen, Zhana Haimon, Tomas Stopka, Ziv Shulman

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. BPTF is essential for vaccine-induced germinal center B cell responses.Journal of immunology (Baltimore, Md. : 1950) · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Liat Stoler-BarakDepartment of Systems Immunology, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0001-8194-9979
Dominik SchmiedelDepartment of Systems Immunology, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0003-3384-5651
Avital Sarusi-PortuguezMantoux Bioinformatics Institute of the Nancy and Stephen Grand Israel National Center for Personalized Medicine, Weizmann Institute of Science , Rehovot, Israel.ORCID 0000-0002-0628-1443
Adi RogelDepartment of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot, Israel.ORCID 0009-0003-1739-3955
Ronnie Blecher-GonenThe Crown Genomics Institute of the Nancy and Stephen Grand Israel National Center for Personalized Medicine, Weizmann Institute of Science , Rehovot, Israel.ORCID 0000-0003-2847-1149
Zhana HaimonDepartment of Immunology and Regenerative Biology, Weizmann Institute of Science, Rehovot, Israel.ORCID 0009-0004-9592-312X
Tomas StopkaBIOCEV, First Faculty of Medicine, Charles University, Vestec, Czech Republic.ORCID 0000-0001-7236-6894
Ziv ShulmanDepartment of Systems Immunology, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0002-9604-212X

Funding

European Molecular Biology OrganizationEuropean Research Council 101001613Grantová Agentura České Republiky 24-10435SIsrael Science Foundation 1272/23Morris Kahn Institute for Human ImmunologyNext Generation EUProgramme EXCELES LX22NPO5102
6 · The paper itself

Abstract

The establishment of long-lasting immunity against pathogens is facilitated by the germinal center (GC) reaction, during which B cells increase their antibody affinity and differentiate into antibody-secreting cells (ASC) and memory cells. These events involve modifications in chromatin packaging that orchestrate the profound restructuring of gene expression networks that determine cell fate. While several chromatin remodelers were implicated in lymphocyte functions, less is known about SMARCA5. Here, using ribosomal pull-down for analyzing translated genes in GC B cells, coupled with functional experiments in mice, we identified SMARCA5 as a key chromatin remodeler in B cells. While the naive B cell compartment remained unaffected following conditional depletion of Smarca5, effective proliferation during B cell activation, immunoglobulin class switching, and as a result GC formation and ASC differentiation were impaired. Single-cell multiomic sequencing analyses revealed that SMARCA5 is crucial for facilitating the transcriptional modifications and genomic accessibility of genes that support B cell activation and differentiation. These findings offer novel insights into the functions of SMARCA5, which can be targeted in various human pathologies.

Indexed as

B-LymphocytesCell DifferentiationChromatin Assembly and DisassemblyChromosomal Proteins, Non-HistoneGerminal CenterAdenosine TriphosphatasesAnimalsImmunoglobulin Class SwitchingLymphocyte ActivationMiceMice, Inbred C57BLAdenosine TriphosphatasesChromosomal Proteins, Non-HistoneSmarca5 protein, mouse

Identifiers

PMID39297882
PMCPMC11413417

What Socratic holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.