Evidence map›Paper›PMID 39304834›Full record

ArticleBMC genomics2024

Evolution of unexpected diversity in a putative mating type locus and its correlation with genome variability reveals likely asexuality in the model mycorrhizal fungus Rhizophagus irregularis.

Soon-Jae Lee, Eric Risse, Ivan D Mateus, Ian R Sanders

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Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Soon-Jae Lee *Department of Ecology and Evolution, University of Lausanne, Lausanne, 1015, Switzerland.
Eric Risse *Department of Ecology and Evolution, University of Lausanne, Lausanne, 1015, Switzerland.
Ivan D MateusDepartment of Ecology and Evolution, University of Lausanne, Lausanne, 1015, Switzerland.
Ian R SandersDepartment of Ecology and Evolution, University of Lausanne, Lausanne, 1015, Switzerland. ian.sanders@unil.ch.ORCID http://orcid.org/0000-0002-9591-8214

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundArbuscular mycorrhizal fungi (AMF) form mutualistic partnerships with approximately 80% of plant species. AMF, and their diversity, play a fundamental role in plant growth, driving plant diversity, and global carbon cycles. Knowing whether AMF are sexual or asexual has fundamental consequences for how they can be used in agricultural applications. Evidence for and against sexuality in the model AMF, Rhizophagus irregularis, has been proposed. The discovery of a putative mating-type locus (MAT locus) in R. irregularis, and the previously suggested recombination among nuclei of a dikaryon R. irregularis isolate, potentially suggested sexuality. Unless undergoing frequent sexual reproduction, evolution of MAT-locus diversity is expected to be very low. Additionally, in sexual species, MAT-locus evolution is decoupled from the evolution of arbitrary genome-wide loci.

resultsWe studied MAT-locus diversity of R. irregularis. This was then compared to diversification in a phosphate transporter gene (PTG), that is not involved in sex, and to genome-wide divergence, defined by 47,378 single nucleotide polymorphisms. Strikingly, we found unexpectedly high MAT-locus diversity indicating that either it is not involved in sex, or that AMF are highly active in sex. However, a strongly congruent evolutionary history of the MAT-locus, PTG and genome-wide arbitrary loci allows us to reject both the hypothesis that the MAT-locus is involved in mating and that the R. irregularis lineage is sexual.

conclusionOur finding shapes the approach to developing more effective AMF strains and is highly informative as it suggests that introduced strains applied in agriculture will not exchange DNA with native populations.

Indexed as

Evolution, MolecularGenes, Mating Type, FungalGenome, FungalMycorrhizaeFungiGenetic VariationGlomeromycotaPhylogenyPolymorphism, Single NucleotideReproduction, AsexualArbuscular mycorrhizal fungi (AMF)AsexualityAsexual reproductionLoss of sexMating-typeRecombinationRhizophagus irregularis

Identifiers

PMID39304834
PMCPMC11414155

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.