Evidence map›Paper›PMID 39313635›Full record

ArticleNature structural & molecular biology2025

Structural insights into CXCR4 modulation and oligomerization.

Kei Saotome, Luke L McGoldrick, Jo-Hao Ho, Trudy F Ramlall, Sweta Shah, Michael J Moore, Jee Hae Kim, Raymond Leidich, William C Olson, Matthew C Franklin

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Advances in Cyclic Peptides Targeting G Protein-Coupled Receptors.Chembiochem : a European journal of chemical biology · 2026
    Review
  2. Article
  3. One-stop evaluation using [Japanese journal of radiology · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Structure basis for C-C chemokine receptor 4 modulation by orthosteric and allosteric antagonists.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kei Saotome *Regeneron Pharmaceuticals, Inc., Tarrytown, NY, USA. kei.saotome@regeneron.com.ORCID http://orcid.org/0000-0002-4135-5356
Luke L McGoldrick *Regeneron Pharmaceuticals, Inc., Tarrytown, NY, USA. luke.mcgoldrick@regeneron.com.ORCID http://orcid.org/0000-0002-8310-7502
Jo-Hao HoRegeneron Pharmaceuticals, Inc., Tarrytown, NY, USA.
Trudy F RamlallRegeneron Pharmaceuticals, Inc., Tarrytown, NY, USA.
Sweta ShahRegeneron Pharmaceuticals, Inc., Tarrytown, NY, USA.
Michael J MooreRegeneron Pharmaceuticals, Inc., Tarrytown, NY, USA.
Jee Hae KimRegeneron Pharmaceuticals, Inc., Tarrytown, NY, USA.
Raymond LeidichRegeneron Pharmaceuticals, Inc., Tarrytown, NY, USA.
William C OlsonRegeneron Pharmaceuticals, Inc., Tarrytown, NY, USA.
Matthew C FranklinRegeneron Pharmaceuticals, Inc., Tarrytown, NY, USA. matthew.franklin@regeneron.com.ORCID http://orcid.org/0000-0002-1482-0136

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Activation of the chemokine receptor CXCR4 by its chemokine ligand CXCL12 regulates diverse cellular processes. Previously reported crystal structures of CXCR4 revealed the architecture of an inactive, homodimeric receptor. However, many structural aspects of CXCR4 remain poorly understood. Here, we use cryo-electron microscopy to investigate various modes of human CXCR4 regulation. CXCL12 activates CXCR4 by inserting its N terminus deep into the CXCR4 orthosteric pocket. The binding of US Food and Drug Administration-approved antagonist AMD3100 is stabilized by electrostatic interactions with acidic residues in the seven-transmembrane-helix bundle. A potent antibody blocker, REGN7663, binds across the extracellular face of CXCR4 and inserts its complementarity-determining region H3 loop into the orthosteric pocket. Trimeric and tetrameric structures of CXCR4 reveal modes of G-protein-coupled receptor oligomerization. We show that CXCR4 adopts distinct subunit conformations in trimeric and tetrameric assemblies, highlighting how oligomerization could allosterically regulate chemokine receptor function.

Indexed as

Receptors, CXCR4BenzylaminesBinding SitesChemokine CXCL12Cryoelectron MicroscopyCyclamsHeterocyclic CompoundsHumansModels, MolecularProtein BindingProtein ConformationProtein MultimerizationBenzylaminesChemokine CXCL12CXCL12 protein, humanCXCR4 protein, humanCyclamsHeterocyclic CompoundsplerixaforReceptors, CXCR4

Identifiers

PMID39313635
PMCPMC11832422

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.