Evidence map›Paper›PMID 39325545›Full record

ArticleJCI insight2024

Analysis of CNS autoimmunity in genetically diverse mice reveals unique phenotypes and mechanisms.

Emily A Nelson, Anna L Tyler, Taylor Lakusta-Wong, Karolyn G Lahue, Katherine C Hankes, Cory Teuscher, Rachel M Lynch, Martin T Ferris, J Matthew Mahoney, Dimitry N Krementsov

Abstract read
In one paragraph

Article in JCI insight, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Emily A NelsonDepartment of Biomedical and Health Sciences, University of Vermont (UVM), Burlington, Vermont, USA.
Anna L TylerThe Jackson Laboratory, Bar Harbor, Maine, USA.
Taylor Lakusta-WongDepartment of Neurological Sciences and.
Karolyn G LahueDepartment of Biomedical and Health Sciences, University of Vermont (UVM), Burlington, Vermont, USA.
Katherine C HankesDepartment of Biomedical and Health Sciences, University of Vermont (UVM), Burlington, Vermont, USA.
Cory TeuscherDepartment of Medicine, UVM, Larner College of Medicine, Burlington, Vermont, USA.
Rachel M LynchDepartment of Genetics, University of North Carolina at Chapel Hill (UNC), Chapel Hill, North Carolina, USA.
Martin T FerrisDepartment of Genetics, University of North Carolina at Chapel Hill (UNC), Chapel Hill, North Carolina, USA.
J Matthew MahoneyThe Jackson Laboratory, Bar Harbor, Maine, USA.
Dimitry N KrementsovDepartment of Biomedical and Health Sciences, University of Vermont (UVM), Burlington, Vermont, USA.

Funding

Unlocking Zika Virus Immune Control and Pathogenesis with the Collaborative CrossU19AI100625 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI PARDO-MANUEL DE VILLENA, FERNANDO · 2012 to 2021
$36.6M
Resource Section - Core 001U42OD010924 · OD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TERRY R MAGNUSON · 2012 to 2026
$24.5M
Vermont Immunology/Infectious Diseases CenterP30GM118228 · NIGMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI BUDD, RALPH C · 2016 to 2021
$6.8M
Vermont Immunology/Infectious Diseases Training GrantT32AI055402 · NIAID · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI GARY E WARD · 2005 to 2026
$2.7M
Novel mouse models to dissect the role of genetics, sex, and environment in heterogeneous outcomes in CNS autoimmune diseaseR01AI172166 · NIAID · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI Dimitry N Krementsov · 2022 to 2026
$2.6M
Next generation systems analysis of pathogenetic mechanisms underlying CNS autoimmunityR21AI145306 · NIAID · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI KREMENTSOV, DIMITRY N · 2019 to 2020
$429k
Acquisition of a new Flow CytometerS10OD026843 · OD · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI BOYSON, JONATHAN E · 2019 to 2019
$204k
NIAID NIH HHS R01 AI172166NIAID NIH HHS R21 AI145306NIAID NIH HHS T32 AI055402NIAID NIH HHS U19 AI100625NIGMS NIH HHS P30 GM118228NIH HHS S10 OD026843NIH HHS U42 OD010924
6 · The paper itself

Abstract

Multiple sclerosis (MS) is a complex disease with significant heterogeneity in disease course and progression. Genetic studies have identified numerous loci associated with MS risk, but the genetic basis of disease progression remains elusive. To address this, we leveraged the Collaborative Cross (CC), a genetically diverse mouse strain panel, and experimental autoimmune encephalomyelitis (EAE). The 32 CC strains studied captured a wide spectrum of EAE severity, trajectory, and presentation, including severe-progressive, monophasic, relapsing remitting, and axial rotary-EAE (AR-EAE), accompanied by distinct immunopathology. Sex differences in EAE severity were observed in 6 strains. Quantitative trait locus analysis revealed distinct genetic linkage patterns for different EAE phenotypes, including EAE severity and incidence of AR-EAE. Machine learning-based approaches prioritized candidate genes for loci underlying EAE severity (Abcc4 and Gpc6) and AR-EAE (Yap1 and Dync2h1). This work expands the EAE phenotypic repertoire and identifies potentially novel loci controlling unique EAE phenotypes, supporting the hypothesis that heterogeneity in MS disease course is driven by genetic variation.

Indexed as

Encephalomyelitis, Autoimmune, ExperimentalMultiple SclerosisPhenotypeQuantitative Trait LociAnimalsAutoimmunityCentral Nervous SystemCollaborative Cross MiceDisease Models, AnimalDisease ProgressionFemaleGenetic LinkageMaleMiceYAP-Signaling ProteinsYAP-Signaling ProteinsAutoimmunityGeneticsGenetic variationMouse modelsMultiple sclerosis

Identifiers

PMID39325545
PMCPMC11601571

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.